Bioinformatic python3 scripts to predict eukaryotic proteins in Metagenome-Assembled Genomes.
Dependances:
Python3 packages :
- numpy,
- pandas,
- biopython,
- pyfasta,
- time,
- argparse,
- pprint
This workflow require the following software :
- KRAKEN2 : contig taxonomic classification,
- AUGUSTUS : protein prediction,
- DIAMOND : protein taxonomic annotation,
- BUSCO : protein prediction quality.
