Check R Notebooks

Transform R notebooks to Rmd; Add checks for R notebooks; Small mod to checks in Python notebooks #15

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Run time

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Job	Run time
test-R-notebooks (PM1)	6m 47s
test-R-notebooks (PM2)	7m 3s
test-R-notebooks (PM3)	7m 0s
test-R-notebooks (PM4)	6m 58s
test-R-notebooks (PM5)	6m 56s
test-R-notebooks (CM1)	6m 43s
test-R-notebooks (CM2)	7m 3s
test-R-notebooks (CM3)	6m 59s
test-R-notebooks (AC1)	7m 3s
test-R-notebooks (AC2)	7m 1s
test-R-notebooks (T)	7m 1s
	1h 16m 34s