Check R Notebooks

Transform R notebooks to Rmd; Add checks for R notebooks; Small mod to checks in Python notebooks #24

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Run time

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Job	Run time
test-R-notebooks (PM1)	13m 49s
test-R-notebooks (PM2)	1h 41m 47s
test-R-notebooks (PM3)	18m 55s
test-R-notebooks (PM4)	2h 24m 58s
test-R-notebooks (PM5)	20m 27s
test-R-notebooks (CM1)	12m 50s
test-R-notebooks (CM2)	10m 14s
test-R-notebooks (CM3)	16m 43s
test-R-notebooks (AC1)	11m 9s
test-R-notebooks (AC2)	38m 20s
test-R-notebooks (T)	43m 21s
	7h 12m 33s