Check R Notebooks

Transform R notebooks to Rmd; Add checks for R notebooks; Small mod to checks in Python notebooks #27

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Run time

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Job	Run time
test-R-notebooks (PM1)	16m 18s
test-R-notebooks (PM2)	17m 22s
test-R-notebooks (PM3)	16m 56s
test-R-notebooks (PM4)	17m 12s
test-R-notebooks (PM5)	13m 46s
test-R-notebooks (CM1)	12m 9s
test-R-notebooks (CM2)	7m 14s
test-R-notebooks (CM3)	15m 59s
test-R-notebooks (AC1)	14m 15s
test-R-notebooks (AC2)	17m 17s
test-R-notebooks (T)	17m 13s
	2h 45m 41s