Update python-package-conda.yml #18
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| name: Run Jupyter Notebooks | |
| on: | |
| push: | |
| branches: | |
| - main | |
| schedule: | |
| - cron: '0 0 * * 0' # Runs once a week on Sunday at midnight | |
| jobs: | |
| run-notebooks: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, windows-latest, macos-latest] | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v2 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: '3.8' # Adjust this to your preferred Python version | |
| - name: Install dependencies | |
| run: | | |
| python3.8 -m pip install --upgrade pip | |
| pip install jupyter nbconvert flake8 ipython | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| shell: bash | |
| - name: Convert Jupyter notebooks to Python scripts | |
| run: | | |
| mkdir -p converted_scripts | |
| for notebook in PM1/*.ipynb; do | |
| [ -e "$notebook" ] || continue | |
| jupyter nbconvert --to script "$notebook" | |
| mv "${notebook%.ipynb}.py" converted_scripts/ | |
| done | |
| shell: bash | |
| - name: Run Flake8 linting | |
| run: | | |
| mkdir -p linting_logs | |
| for script in converted_scripts/*.py; do | |
| [ -e "$script" ] || continue | |
| flake8 "$script" > "linting_logs/$(basename "$script" .py)_linting.log" 2>&1 || true | |
| done | |
| shell: bash | |
| - name: Run Python scripts with IPython | |
| run: | | |
| mkdir -p logs | |
| for script in converted_scripts/*.py; do | |
| [ -e "$script" ] || continue | |
| echo "Running $script" | |
| ipython "$script" > "logs/$(basename "$script" .py).log" 2>&1 || true | |
| done | |
| shell: bash | |
| - name: Aggregate and report errors and warnings | |
| run: | | |
| echo "Aggregating errors and warnings..." | |
| grep -E "Error|Warning" logs/*.log linting_logs/*.log > logs/errors_and_warnings.log || true | |
| echo "Errors and Warnings:" | |
| cat logs/errors_and_warnings.log | |
| shell: bash | |
| - name: Zip the Python scripts | |
| run: | | |
| zip -r converted_scripts.zip converted_scripts | |
| shell: bash | |
| - name: Upload the zip file | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: converted-scripts | |
| path: converted_scripts.zip |