Rename transform-R-to-Rmd to transform-R-to-Rmd.yml #1

	name: Convert R Notebooks to Rmd

	on:
	push

	jobs:
	convert-ipynb-to-rmd:
	runs-on: ubuntu-latest

	steps:
	- name: Checkout repository
	uses: actions/checkout@v2

	- name: Set up Python
	uses: actions/setup-python@v2
	with:
	python-version: '3.8' # Specify your Python version here

	- name: Install nbconvert
	run: \|
	python -m pip install --upgrade pip
	pip install nbconvert

	- name: Convert .ipynb to .Rmd
	run: \|
	for notebook in PM1/*.irnb; do # Update this path to your directory
	jupyter nbconvert --to rmarkdown "$notebook"
	done

	- name: Commit and push changes
	run: \|
	git config --global user.name 'github-actions[bot]'
	git config --global user.email 'github-actions[bot]@users.noreply.github.com'
	git add PM1/*.Rmd # Update this path to your directory
	git commit -m 'Convert .ipynb to .Rmd'
	git push
	env:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

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