Supplementary data for "Accurate nuclear quantum statistics on machine-learned classical effective potentials"
Scripts, input files, codes and models required to reproduce the results of "I. Zaporozhets, F. Musil, V. Kapil, & C.Clementi (2024). Accurate nuclear quantum statistics on machine-learned classical effective potentials. arXiv: 2407.03448.
0_morse_potential
: particle in 1D Morse potential1_h2o_molecule
: single H2O molecule in vacuum2_zundel_cation
: Zundel cation3_bulk_h2o
: Water box (256 molecules)
- Setup conda environment:
cd setup
./setup_environment.sh
activate picg
- Download and install
te-pigs
with
pip install git+https://github.com/felixmusil/[email protected]
pip install git+https://github.com/felixmusil/mace.git@develop
- Download and install
i-pi
: https://github.com/venkatkapil24/i-pi.git
to use i-pi you will need to setup the environment variables using
source $PATH2IPI/env.sh
- For bulk water only:
Download interface for MBPol calculations,
MBX-pythonic
: https://github.com/venkatkapil24/MBX-pythonic.git and setup enfironmental variable$MBX_HOME
, eg,export $MBX_HOME=$HOME/software/MBX-pythonic/
Training data are available on Zenodo (https://doi.org/10.5281/zenodo.12684727).
To use the datasets, first, download and unpack CG_quantum_statistics.zip
. Then, copy the dataset/datasets corresponding to the system of interest to the corresnonding training data generation folder (e.g., copy CG_quantum_statistics/1_h2o_molecule/h2o.h5
to 1_h2o_molecule/01_training_data_generation/
)
The content of this repository is licensed under the CC-BY-SA-4.0 license. See the file LICENSE
for details.