cleaning

DESCRIPTION

@@ -2,9 +2,9 @@ Package: shinystan
 Title: Interactive Visual and Numerical Diagnostics and Posterior Analysis for 
   for Bayesian Models
 Version: 2.0.0
-Date: 2015-08-07
+Date: 2015-08-08
 Authors@R: c(person("Jonah", "Gabry", role = c("aut", "cre"),
-    email = "[email protected]", comment = "Stan Development Team"),
+    email = "[email protected]"),
       person(family = "Stan Development Team", role = "ctb"),
       person("Michael", "Andreae", role = "ctb"),
       person("Michael", "Betancourt", role = "ctb"),
@@ -37,7 +37,7 @@ Depends:
 License: GPL (>=3)
 LazyData: true
 Suggests: 
-    coda (>= 0.17-1),
+    coda,
     knitr (>= 1.9),
     rstan (>= 2.7),
     shinyapps (>= 0.4),

R/launch_shinystan.R

@@ -20,11 +20,10 @@
 #' @param object An object of class shinystan, stanfit, or stanreg. See
 #'   \code{\link{as.shinystan}} for converting other objects to a shinystan
 #'   object (sso).
-#' @param rstudio For RStudio users, should the app launch in RStudio's Viewer? 
-#'   The default is to launch the app in the user's default web browser instead 
-#'   of the RStudio viewer unless the user has set 
-#'   \code{options(shinystan.rstudio = TRUE)}, in which case the default is to
-#'   launch in RStudio's Viewer.
+#' @param rstudio Only relevant for RStudio users. If \code{TRUE} (the default),
+#'   the app will launch in RStudio's pop-up Viewer rather than the default web 
+#'   browser. Users can change the default to \code{FALSE} by setting the global
+#'   option \code{options(shinystan.rstudio = FALSE)}.
 #' @param ... Optional arguments to pass to \code{\link[shiny]{runApp}}.
 #' @return An S4 shinystan object.
 #'

R/launch_shinystan_demo.R

@@ -17,11 +17,10 @@
 #'
 #' @export
 #'
-#' @param rstudio For RStudio users, should the app launch in RStudio's Viewer? 
-#'   The default is to launch the app in the user's default web browser instead 
-#'   of the RStudio viewer unless the user has set 
-#'   \code{options(shinystan.rstudio = TRUE)}, in which case the default is to
-#'   launch in RStudio's Viewer.
+#' @param rstudio Only relevant for RStudio users. If \code{TRUE} (the default),
+#'   the app will launch in RStudio's pop-up Viewer rather than the default web 
+#'   browser. Users can change the default to \code{FALSE} by setting the global
+#'   option \code{options(shinystan.rstudio = FALSE)}.
 #' @param ... Optional arguments to pass to \code{\link[shiny]{runApp}}.
 #' @return An S4 shinystan object.
 #'   

R/zzz.R

@@ -22,7 +22,7 @@
 .onLoad <- function(libname, pkgname) {
   op <- options()
   op.shinystan <- list(
-    shinystan.rstudio = FALSE
+    shinystan.rstudio = TRUE
   )
   set_ops <- !(names(op.shinystan) %in% names(op))
   if (any(set_ops)) options(op.shinystan[set_ops])

man/launch_shinystan.Rd

@@ -11,11 +11,10 @@ launch_shinystan(object, rstudio = getOption("shinystan.rstudio"), ...)
 \code{\link{as.shinystan}} for converting other objects to a shinystan
 object (sso).}
 
-\item{rstudio}{For RStudio users, should the app launch in RStudio's Viewer?
-The default is to launch the app in the user's default web browser instead
-of the RStudio viewer unless the user has set
-\code{options(shinystan.rstudio = TRUE)}, in which case the default is to
-launch in RStudio's Viewer.}
+\item{rstudio}{Only relevant for RStudio users. If \code{TRUE} (the default),
+the app will launch in RStudio's pop-up Viewer rather than the default web
+browser. Users can change the default to \code{FALSE} by setting the global
+option \code{options(shinystan.rstudio = FALSE)}.}
 
 \item{...}{Optional arguments to pass to \code{\link[shiny]{runApp}}.}
 }

man/launch_shinystan_demo.Rd

@@ -7,11 +7,10 @@
 launch_shinystan_demo(rstudio = getOption("shinystan.rstudio"), ...)
 }
 \arguments{
-\item{rstudio}{For RStudio users, should the app launch in RStudio's Viewer?
-The default is to launch the app in the user's default web browser instead
-of the RStudio viewer unless the user has set
-\code{options(shinystan.rstudio = TRUE)}, in which case the default is to
-launch in RStudio's Viewer.}
+\item{rstudio}{Only relevant for RStudio users. If \code{TRUE} (the default),
+the app will launch in RStudio's pop-up Viewer rather than the default web
+browser. Users can change the default to \code{FALSE} by setting the global
+option \code{options(shinystan.rstudio = FALSE)}.}
 
 \item{...}{Optional arguments to pass to \code{\link[shiny]{runApp}}.}
 }