Fix undefined behavior when getting the current working directory from std::filesystem #728
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HubLot
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Oct 17, 2024
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acmnpv
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Oct 25, 2024
All changes are limited to the copy of the library in `src/external/colvars`. The following is a list of relevant pull requests (bugfixes only) in the library's repository: - 728 Fix undefined behavior when getting the current working directory from std::filesystem Colvars/colvars#728 (@giacomofiorin) - 724 Fix gradients and metric functions of distanceDir Colvars/colvars#724 (@giacomofiorin) - 715 Add missing rotation in orientation component Colvars/colvars#715 (@giacomofiorin) - 713 fix: try to solve #87 for non-scala components Colvars/colvars#713 (@HanatoK) - 706 BUGFIX for Segmentation fault in colvarbias_meta::calc_energy() with useGrids off Colvars/colvars#706 (@alphataubio) - 694 More robust condition to decide when biases run on thread 0 Colvars/colvars#694 (@giacomofiorin) - 675 Fix initialization of histogram output files and move it to the right place Colvars/colvars#675 (@giacomofiorin) Authors: @alphataubio, @giacomofiorin, @HanatoK
jhenin
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Dec 16, 2024
- 759 min_image fix; Saves long runs from crashes; Colvars/colvars#759 (@PolyachenkoYA) - 728 Fix undefined behavior when getting the current working directory from std::filesystem Colvars/colvars#728 (@giacomofiorin) - 724 Fix gradients and metric functions of distanceDir Colvars/colvars#724 (@giacomofiorin) - 715 Add missing rotation in orientation component Colvars/colvars#715 (@giacomofiorin) - 713 fix: try to solve lammps#87 for non-scala components Colvars/colvars#713 (@HanatoK) - 706 BUGFIX for Segmentation fault in colvarbias_meta::calc_energy() with useGrids off Colvars/colvars#706 (@alphataubio) - 701 Do not try accessing LAMMPS proxy object before allocating it Colvars/colvars#701 (@giacomofiorin) Authors: @alphataubio, @giacomofiorin, @HanatoK, @PolyachenkoYA
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Adds two functions
colvarproxy_io::get_current_work_dir()andcolvarproxy_io::join_paths()to replace the code currently used incolvarbias_meta.cpp. It's possible that these may be removed again sometime in the future.Fixes #726