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@DCAN-Labs

Center for Developmental NeuroImaging (CDNI)

Our lab uses MRI to examine typical and atypical brain development. Our research is examining children with ASD as well as children and adults with ADHD.

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  1. BWAS BWAS Public

    Code to run Brain Wide Association Studies to derive PolyNeuro Risk Scores

    MATLAB 3 1

  2. biceps biceps Public

    Brain Imaging Connectivity Extraction Program Solution

    C

  3. BIBSnet BIBSnet Public

    This BIDS App provides the utility of creating a nnU-Net anatomical MRI segmentation and mask with a infant brain trained model. It can easily be included in other processing pipelines and for circ…

    Python 5 8

  4. CABINET CABINET Public

    CABINET is a utility that standardizes subsequent container execution. Emphasizing reproducibility, users can share JSONs to exactly replicate how containerized processes follow each other.

    Python 1 1

  5. abcd-hcp-pipeline abcd-hcp-pipeline Public

    bids application for processing functional MRI data, robust to scanner, acquisition and age variability.

    Python 51 20

  6. infant-abcd-bids-pipeline infant-abcd-bids-pipeline Public

    Human infant pipeline, based on abcd-hcp-pipeline, to process fMRI data.

    Python 8 4

Repositories

Showing 10 of 141 repositories
  • hbcd-docs Public
    DCAN-Labs/hbcd-docs’s past year of commit activity
    Python 1 Apache-2.0 3 1 0 Updated Feb 21, 2025
  • Seg-Model-Creation-GUI Public

    A user interface for nNUnet model training

    DCAN-Labs/Seg-Model-Creation-GUI’s past year of commit activity
    Python 0 BSD-2-Clause 1 5 0 Updated Feb 21, 2025
  • loes-scoring-2 Public

    Code for automated Loes scoring.

    DCAN-Labs/loes-scoring-2’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Feb 20, 2025
  • DCAN-Labs/hbcd-docs-internal’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Feb 20, 2025
  • HBCD_Data_Dictionaries Public

    repo to help manage hbcd data dictionaries

    DCAN-Labs/HBCD_Data_Dictionaries’s past year of commit activity
    0 2 0 0 Updated Feb 20, 2025
  • nhp-abcd-bids-pipeline-synth Public Forked from DCAN-Labs/nhp-abcd-bids-pipeline

    Non-human primate (i.e., macaque) pipeline, based on abcd-hcp-pipeline, to process fMRI data. Incorporates Synth, a fieldmap-less distortion correction method for fMRI.

    DCAN-Labs/nhp-abcd-bids-pipeline-synth’s past year of commit activity
    Shell 0 BSD-3-Clause 5 0 1 Updated Feb 19, 2025
  • abcd-dicom2bids Public

    For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of spin echo field maps, and correcting the sidecar JSON files to meet BIDS Validator spec.

    DCAN-Labs/abcd-dicom2bids’s past year of commit activity
    Python 19 BSD-3-Clause 20 0 1 Updated Feb 19, 2025
  • DCAN-Labs/abcc_dicom2bids_s3’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Feb 18, 2025
  • BrainSwipes Public

    A crowdsource quality assurance application for use with neuroimaging datasets.

    DCAN-Labs/BrainSwipes’s past year of commit activity
    Vue 0 Apache-2.0 1 10 0 Updated Feb 17, 2025
  • dconn_shrinker Public

    Code to convert dconn.nii to h5 file format and vice versa

    DCAN-Labs/dconn_shrinker’s past year of commit activity
    Python 0 0 0 0 Updated Feb 13, 2025

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