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update tdr schema
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rsc3 committed Apr 28, 2024
1 parent a18c350 commit 66f4050
Showing 1 changed file with 1 addition and 3 deletions.
4 changes: 1 addition & 3 deletions content/tools/python/output/biocore_tdr_schema.json
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{"tables": [{"name": "AnVILBioSample", "columns": [{"name": "anatomical_site", "datatype": "string", "array_of": false, "required": false}, {"name": "apriori_cell_type", "datatype": "string", "array_of": true, "required": false}, {"name": "biosample_id", "datatype": "string", "array_of": false, "required": true}, {"name": "biosample_type", "datatype": "string", "array_of": false, "required": false}, {"name": "disease", "datatype": "string", "array_of": false, "required": false}, {"name": "donor_age_at_collection_lower_bound", "datatype": "numeric", "array_of": false, "required": false}, {"name": "donor_age_at_collection_unit", "datatype": "string", "array_of": false, "required": false}, {"name": "donor_age_at_collection_upper_bound", "datatype": "numeric", "array_of": false, "required": false}, {"name": "donor_id", "datatype": "string", "array_of": false, "required": false}], "primaryKey": ["biosample_id"]}, {"name": "AnVILDonor", "columns": [{"name": "donor_id", "datatype": "string", "array_of": false, "required": true}, {"name": "genetic_ancestry", "datatype": "string", "array_of": true, "required": false}, {"name": "human_phenotype", "datatype": "string", "array_of": false, "required": false}, {"name": "organism_type", "datatype": "string", "array_of": false, "required": false}, {"name": "phenotypic_sex", "datatype": "string", "array_of": false, "required": false}, {"name": "reported_ethnicity", "datatype": "string", "array_of": true, "required": false}], "primaryKey": ["donor_id"]}, {"name": "AnVILFile", "columns": [{"name": "data_modality", "datatype": "string", "array_of": true, "required": false}, {"name": "file_format", "datatype": "string", "array_of": false, "required": false}, {"name": "file_id", "datatype": "string", "array_of": false, "required": true}, {"name": "file_md5sum", "datatype": "string", "array_of": false, "required": false}, {"name": "file_name", "datatype": "string", "array_of": false, "required": false}, {"name": "file_ref", "datatype": "string", "array_of": false, "required": false}, {"name": "file_size", "datatype": "integer", "array_of": false, "required": false}, {"name": "reference_assembly", "datatype": "string", "array_of": true, "required": false}], "primaryKey": ["file_id"]}], "relationships": [{"name": "AnVILBioSample.donor_id_to_AnVILDonor.donor_id", "from": {"table": "AnVILBioSample", "column": "donor_id"}, "to": {"table": "AnVILDonor", "column": "donor_id"}}]}

‪(307) 277-6035‬
{"tables": [{"name": "AnVILBioSample", "columns": [{"name": "anatomical_site", "datatype": "string", "array_of": false, "required": false}, {"name": "apriori_cell_type", "datatype": "string", "array_of": true, "required": false}, {"name": "biosample_id", "datatype": "string", "array_of": false, "required": true}, {"name": "biosample_type", "datatype": "string", "array_of": false, "required": false}, {"name": "disease", "datatype": "string", "array_of": false, "required": false}, {"name": "donor_age_at_collection_lower_bound", "datatype": "numeric", "array_of": false, "required": false}, {"name": "donor_age_at_collection_unit", "datatype": "string", "array_of": false, "required": false}, {"name": "donor_age_at_collection_upper_bound", "datatype": "numeric", "array_of": false, "required": false}, {"name": "donor_id", "datatype": "string", "array_of": false, "required": false}], "primaryKey": ["biosample_id"]}, {"name": "AnVILDonor", "columns": [{"name": "donor_id", "datatype": "string", "array_of": false, "required": true}, {"name": "genetic_ancestry", "datatype": "string", "array_of": true, "required": false}, {"name": "human_phenotype", "datatype": "string", "array_of": false, "required": false}, {"name": "organism_type", "datatype": "string", "array_of": false, "required": false}, {"name": "phenotypic_sex", "datatype": "string", "array_of": false, "required": false}, {"name": "reported_ethnicity", "datatype": "string", "array_of": true, "required": false}], "primaryKey": ["donor_id"]}, {"name": "AnVILFile", "columns": [{"name": "data_modality", "datatype": "string", "array_of": true, "required": false}, {"name": "file_format", "datatype": "string", "array_of": false, "required": false}, {"name": "file_id", "datatype": "string", "array_of": false, "required": true}, {"name": "file_md5sum", "datatype": "string", "array_of": false, "required": false}, {"name": "file_name", "datatype": "string", "array_of": false, "required": false}, {"name": "file_ref", "datatype": "string", "array_of": false, "required": false}, {"name": "file_size", "datatype": "integer", "array_of": false, "required": false}, {"name": "reference_assembly", "datatype": "string", "array_of": true, "required": false}], "primaryKey": ["file_id"]}], "relationships": [{"name": "AnVILBioSample.donor_id_to_AnVILDonor.donor_id", "from": {"table": "AnVILBioSample", "column": "donor_id"}, "to": {"table": "AnVILDonor", "column": "donor_id"}}]}

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