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DataBiosphere · Jul 31, 2024 · 7a144b8 · 7a144b8
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diff --git a/AnVILBioCoreMinimal.xlsx b/AnVILBioCoreMinimal.xlsx
diff --git a/content/excel/AnVILBioCoreMinimal.xlsx b/content/excel/AnVILBioCoreMinimal.xlsx
diff --git a/content/linkml/data_test/AnVILBioCoreFake - AnVILBioSample.tsv b/content/linkml/data_test/AnVILBioCoreFake - AnVILBioSample.tsv
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+biosample_id	anatomical_site	apriori_cell_type	biosample_type	disease	donor_age_at_collection_unit	donor_age_at_collection_lower_bound	donor_age_at_collection_upper_bound	donor_id_fk
+1	Brain	Neuron	Tissue	Dementia	years	10	28	1
+2	Heart	Cardiomyocyte	Tissue	CAD	years	56	71	1
+3	Liver	Hepatocyte	Tissue	Cirrhosis	years	66	84	1
+4	Lung	Alveolar cell	Tissue	COPD	years	62	87	2
+5	Kidney	Nephron	Tissue	CKD	years	77	97	2
+6	Skin	Keratinocyte	Tissue	Psoriasis	years	91	97	2
diff --git a/content/linkml/data_test/AnVILBioCoreFake - AnVILDonor.tsv b/content/linkml/data_test/AnVILBioCoreFake - AnVILDonor.tsv
@@ -0,0 +1,3 @@
+donor_id	organism_type	phenotypic_sex	reported_ethnicity	genetic_ancestry	human_phenotype
+1	Homo sapiens	male	Caucasian	European	HP:0001250
+2	Homo sapiens	female	Asian	East Asian	HP:0004322
diff --git a/content/linkml/data_test/AnVILBioCoreFake - AnVILFile.tsv b/content/linkml/data_test/AnVILBioCoreFake - AnVILFile.tsv
@@ -0,0 +1,7 @@
+file_id	data_modality	file_format	file_size	file_md5sum	file_name	file_ref	reference_assembly	biosample_id_fk
+1	Genomic	FASTQ	2 GB	d41d8cd98f00b204e9800998ecf8427e	file1.fastq	hg19	GRCh37	1
+2	Transcriptomic	BAM	1.5 GB	098f6bcd4621d373cade4e832627b4f6	file2.bam	hg38	GRCh38	2
+3	Epigenomic	BED	500 MB	5d41402abc4b2a76b9719d911017c592	file3.bed	hg19	GRCh37	3
+4	Genomic	VCF	3 GB	a4b7b34a0d4a8b3a0f5b4f5a5c87b788	file4.vcf	hg38	GRCh38	4
+5	Transcriptomic	GTF	1 GB	8277e0910d750195b448797616e091ad	file5.gtf	hg19	GRCh37	5
+6	Epigenomic	BIGWIG	2.5 GB	6dcd4ce23d88e2ee95838f7b014b628e	file6.bigwig	hg38	GRCh38	6