try to make dockstore happy #140
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mmorgantaylor
approved these changes
Oct 8, 2024
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looks good! tested the ref panel wdl (bed file generation only) here and it worked well: https://app.terra.bio/#workspaces/allofus-drc-imputation/AOU%20ANVIL%20Phasing/job_history/dc4881c3-8733-40f0-87b6-317da111faa0
| input: | ||
| ref_panel_interval_list = GatherChunkedIntervalLists.interval_list, | ||
| basename = custom_basename_with_chr, | ||
| if (create_bed_files){ |
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add space between ) and {
| input: | ||
| vcf = ref_vcf[idx], | ||
| basename = custom_basename_with_chr | ||
| if (create_brefs){ |
added 2 commits
October 8, 2024 11:12
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Description
small update to the create ref panel wdl to be easier to use and get dockstore working correctly with all of our wdls
Jira Ticket
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