Skip to content

Commit

Permalink
testing things
Browse files Browse the repository at this point in the history
  • Loading branch information
SouthEndMusic committed Aug 27, 2024
1 parent 1bffcd7 commit 0780763
Show file tree
Hide file tree
Showing 4 changed files with 210 additions and 18 deletions.
171 changes: 164 additions & 7 deletions Manifest.toml
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@

julia_version = "1.10.4"
manifest_format = "2.0"
project_hash = "c2cb085c326f61a96abd1a295e6fa775c585beba"
project_hash = "d7f64d060f40a31b54c777f8d6fe116a3d315602"

[[deps.ADTypes]]
git-tree-sha1 = "6778bcc27496dae5723ff37ee30af451db8b35fe"
Expand Down Expand Up @@ -50,6 +50,12 @@ weakdeps = ["StaticArrays"]
[deps.Adapt.extensions]
AdaptStaticArraysExt = "StaticArrays"

[[deps.AliasTables]]
deps = ["PtrArrays", "Random"]
git-tree-sha1 = "9876e1e164b144ca45e9e3198d0b689cadfed9ff"
uuid = "66dad0bd-aa9a-41b7-9441-69ab47430ed8"
version = "1.1.3"

[[deps.ArgCheck]]
git-tree-sha1 = "a3a402a35a2f7e0b87828ccabbd5ebfbebe356b4"
uuid = "dce04be8-c92d-5529-be00-80e4d2c0e197"
Expand Down Expand Up @@ -204,6 +210,11 @@ git-tree-sha1 = "ed0be9a9c1a6b6dec7aac15f8977f16ad6a9796c"
uuid = "6b39b394-51ab-5f42-8807-6242bab2b4c2"
version = "0.8.4"

[[deps.Combinatorics]]
git-tree-sha1 = "08c8b6831dc00bfea825826be0bc8336fc369860"
uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa"
version = "1.0.2"

[[deps.CommonSolve]]
git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c"
uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2"
Expand Down Expand Up @@ -372,6 +383,12 @@ version = "1.0.0"
deps = ["Printf"]
uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"

[[deps.DelimitedFiles]]
deps = ["Mmap"]
git-tree-sha1 = "9e2f36d3c96a820c678f2f1f1782582fcf685bae"
uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab"
version = "1.9.1"

[[deps.DiffEqBase]]
deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"]
git-tree-sha1 = "72950e082d2241a1da1c924147943e2918471af9"
Expand Down Expand Up @@ -473,6 +490,22 @@ version = "0.1.6"
deps = ["Random", "Serialization", "Sockets"]
uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"

[[deps.Distributions]]
deps = ["AliasTables", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"]
git-tree-sha1 = "0e0a1264b0942f1f3abb2b30891f2a590cc652ac"
uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
version = "0.25.110"

[deps.Distributions.extensions]
DistributionsChainRulesCoreExt = "ChainRulesCore"
DistributionsDensityInterfaceExt = "DensityInterface"
DistributionsTestExt = "Test"

[deps.Distributions.weakdeps]
ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
DensityInterface = "b429d917-457f-4dbc-8f4c-0cc954292b1d"
Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[[deps.DocStringExtensions]]
deps = ["LibGit2"]
git-tree-sha1 = "2fb1e02f2b635d0845df5d7c167fec4dd739b00d"
Expand Down Expand Up @@ -551,17 +584,13 @@ deps = ["LinearAlgebra"]
git-tree-sha1 = "0653c0a2396a6da5bc4766c43041ef5fd3efbe57"
uuid = "1a297f60-69ca-5386-bcde-b61e274b549b"
version = "1.11.0"
weakdeps = ["PDMats", "SparseArrays", "Statistics"]

[deps.FillArrays.extensions]
FillArraysPDMatsExt = "PDMats"
FillArraysSparseArraysExt = "SparseArrays"
FillArraysStatisticsExt = "Statistics"

[deps.FillArrays.weakdeps]
PDMats = "90014a1f-27ba-587c-ab20-58faa44d9150"
SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"

[[deps.FindFirstFunctions]]
git-tree-sha1 = "fa0ba2042021409deb144f868abafde0b06be8f0"
uuid = "64ca27bc-2ba2-4a57-88aa-44e436879224"
Expand Down Expand Up @@ -637,6 +666,12 @@ git-tree-sha1 = "ebd18c326fa6cee1efb7da9a3b45cf69da2ed4d9"
uuid = "86223c79-3864-5bf0-83f7-82e725a168b6"
version = "1.11.2"

[[deps.HCubature]]
deps = ["Combinatorics", "DataStructures", "LinearAlgebra", "QuadGK", "StaticArrays"]
git-tree-sha1 = "10f37537bbd83e52c63abf6393f209dbd641fedc"
uuid = "19dc6840-f33b-545b-b366-655c7e3ffd49"
version = "1.6.0"

[[deps.HiGHS]]
deps = ["HiGHS_jll", "MathOptInterface", "PrecompileTools", "SparseArrays"]
git-tree-sha1 = "477bde3ee57657239b38d3bacafcb20082d9a1b2"
Expand All @@ -655,6 +690,12 @@ git-tree-sha1 = "8e070b599339d622e9a081d17230d74a5c473293"
uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0"
version = "0.1.17"

[[deps.HypergeometricFunctions]]
deps = ["LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"]
git-tree-sha1 = "7c4195be1649ae622304031ed46a2f4df989f1eb"
uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a"
version = "0.3.24"

[[deps.IJulia]]
deps = ["Base64", "Conda", "Dates", "InteractiveUtils", "JSON", "Libdl", "Logging", "Markdown", "MbedTLS", "Pkg", "Printf", "REPL", "Random", "SoftGlobalScope", "Test", "UUIDs", "ZMQ"]
git-tree-sha1 = "1702f79fa30f56b68d5b2fd6fb3a9a14ff6f9130"
Expand Down Expand Up @@ -693,6 +734,36 @@ weakdeps = ["ArrowTypes", "Parsers"]
ArrowTypesExt = "ArrowTypes"
ParsersExt = "Parsers"

[[deps.IntegerMathUtils]]
git-tree-sha1 = "b8ffb903da9f7b8cf695a8bead8e01814aa24b30"
uuid = "18e54dd8-cb9d-406c-a71d-865a43cbb235"
version = "0.1.2"

[[deps.Integrals]]
deps = ["CommonSolve", "HCubature", "LinearAlgebra", "MonteCarloIntegration", "QuadGK", "Reexport", "SciMLBase"]
git-tree-sha1 = "ebf5737d823873add85809f2b52e20e3eae71997"
uuid = "de52edbc-65ea-441a-8357-d3a637375a31"
version = "4.4.1"

[deps.Integrals.extensions]
IntegralsArblibExt = "Arblib"
IntegralsCubaExt = "Cuba"
IntegralsCubatureExt = "Cubature"
IntegralsFastGaussQuadratureExt = "FastGaussQuadrature"
IntegralsForwardDiffExt = "ForwardDiff"
IntegralsMCIntegrationExt = "MCIntegration"
IntegralsZygoteExt = ["Zygote", "ChainRulesCore"]

[deps.Integrals.weakdeps]
Arblib = "fb37089c-8514-4489-9461-98f9c8763369"
ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
Cuba = "8a292aeb-7a57-582c-b821-06e4c11590b1"
Cubature = "667455a9-e2ce-5579-9412-b964f529a492"
FastGaussQuadrature = "442a2c76-b920-505d-bb47-c5924d526838"
ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
MCIntegration = "ea1e2de9-7db7-4b42-91ee-0cd1bf6df167"
Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f"

[[deps.IntelOpenMP_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "14eb2b542e748570b56446f4c50fbfb2306ebc45"
Expand Down Expand Up @@ -796,6 +867,12 @@ git-tree-sha1 = "50901ebc375ed41dbf8058da26f9de442febbbec"
uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f"
version = "1.3.1"

[[deps.LatticeRules]]
deps = ["Random"]
git-tree-sha1 = "7f5b02258a3ca0221a6a9710b0a0a2e8fb4957fe"
uuid = "73f95e8e-ec14-4e6a-8b18-0d2e271c4e55"
version = "0.0.1"

[[deps.LayoutPointers]]
deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface"]
git-tree-sha1 = "a9eaadb366f5493a5654e843864c13d8b107548c"
Expand Down Expand Up @@ -1038,6 +1115,12 @@ git-tree-sha1 = "c74e5e7c5f83ccb0bca0377d316d966d296106d4"
uuid = "78c3b35d-d492-501b-9361-3d52fe80e533"
version = "0.7.9"

[[deps.MonteCarloIntegration]]
deps = ["Distributions", "QuasiMonteCarlo", "Random"]
git-tree-sha1 = "722ad522068d31954b4a976b66a26aeccbf509ed"
uuid = "4886b29c-78c9-11e9-0a6e-41e1f4161f7b"
version = "0.2.0"

[[deps.MozillaCACerts_jll]]
uuid = "14a3606d-f60d-562e-9121-12d972cd8159"
version = "2023.1.10"
Expand Down Expand Up @@ -1143,6 +1226,12 @@ git-tree-sha1 = "f20abf8f4ffc0b8c00fea227b514dd3164676327"
uuid = "b2d7f28f-acd6-4007-8b26-bc27716e5513"
version = "0.5.4"

[[deps.PDMats]]
deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
git-tree-sha1 = "949347156c25054de2db3b166c52ac4728cbad65"
uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
version = "0.11.31"

[[deps.PackageCompiler]]
deps = ["Artifacts", "Glob", "LazyArtifacts", "Libdl", "Pkg", "Printf", "RelocatableFolders", "TOML", "UUIDs", "p7zip_jll"]
git-tree-sha1 = "48d4429862157ad5500c4f61444db1b8c32e0a2b"
Expand Down Expand Up @@ -1220,6 +1309,12 @@ git-tree-sha1 = "66b20dd35966a748321d3b2537c4584cf40387c7"
uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d"
version = "2.3.2"

[[deps.Primes]]
deps = ["IntegerMathUtils"]
git-tree-sha1 = "cb420f77dc474d23ee47ca8d14c90810cafe69e7"
uuid = "27ebfcd6-29c5-5fa9-bf4b-fb8fc14df3ae"
version = "0.5.6"

[[deps.Printf]]
deps = ["Unicode"]
uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7"
Expand All @@ -1234,6 +1329,27 @@ git-tree-sha1 = "80d919dee55b9c50e8d9e2da5eeafff3fe58b539"
uuid = "33c8b6b6-d38a-422a-b730-caa89a2f386c"
version = "0.1.4"

[[deps.PtrArrays]]
git-tree-sha1 = "f011fbb92c4d401059b2212c05c0601b70f8b759"
uuid = "43287f4e-b6f4-7ad1-bb20-aadabca52c3d"
version = "1.2.0"

[[deps.QuadGK]]
deps = ["DataStructures", "LinearAlgebra"]
git-tree-sha1 = "e237232771fdafbae3db5c31275303e056afaa9f"
uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc"
version = "2.10.1"

[[deps.QuasiMonteCarlo]]
deps = ["Accessors", "ConcreteStructs", "LatticeRules", "LinearAlgebra", "Primes", "Random", "Requires", "Sobol", "StatsBase"]
git-tree-sha1 = "cc086f8485bce77b6187141e1413c3b55f9a4341"
uuid = "8a4e6c94-4038-4cdc-81c3-7e6ffdb2a71b"
version = "0.3.3"
weakdeps = ["Distributions"]

[deps.QuasiMonteCarlo.extensions]
QuasiMonteCarloDistributionsExt = "Distributions"

[[deps.REPL]]
deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"]
uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"
Expand Down Expand Up @@ -1302,7 +1418,7 @@ uuid = "295af30f-e4ad-537b-8983-00126c2a3abe"
version = "3.5.18"

[[deps.Ribasim]]
deps = ["Accessors", "Arrow", "BasicModelInterface", "CodecZstd", "ComponentArrays", "Configurations", "DBInterface", "DataInterpolations", "DataStructures", "Dates", "DiffEqCallbacks", "EnumX", "FiniteDiff", "ForwardDiff", "Graphs", "HiGHS", "IterTools", "JuMP", "Legolas", "LinearSolve", "Logging", "LoggingExtras", "MetaGraphsNext", "OrdinaryDiffEq", "PreallocationTools", "SQLite", "SciMLBase", "SparseArrays", "SparseConnectivityTracer", "StructArrays", "Tables", "TerminalLoggers", "TranscodingStreams"]
deps = ["Accessors", "Arrow", "BasicModelInterface", "CodecZstd", "ComponentArrays", "Configurations", "DBInterface", "DataInterpolations", "DataStructures", "Dates", "DiffEqCallbacks", "EnumX", "FiniteDiff", "ForwardDiff", "Graphs", "HiGHS", "Integrals", "IterTools", "JuMP", "Legolas", "LinearSolve", "Logging", "LoggingExtras", "MetaGraphsNext", "OrdinaryDiffEq", "PreallocationTools", "SQLite", "SciMLBase", "SparseArrays", "SparseConnectivityTracer", "StructArrays", "Tables", "TerminalLoggers", "TranscodingStreams"]
path = "core"
uuid = "aac5e3d9-0b8f-4d4f-8241-b1a7a9632635"
version = "2024.10.0"
Expand All @@ -1314,6 +1430,18 @@ version = "2024.10.0"
DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
Makie = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a"

[[deps.Rmath]]
deps = ["Random", "Rmath_jll"]
git-tree-sha1 = "f65dcb5fa46aee0cf9ed6274ccbd597adc49aa7b"
uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa"
version = "0.7.1"

[[deps.Rmath_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "e60724fd3beea548353984dc61c943ecddb0e29a"
uuid = "f50d1b31-88e8-58de-be2c-1cc44531875f"
version = "0.4.3+0"

[[deps.RuntimeGeneratedFunctions]]
deps = ["ExprTools", "SHA", "Serialization"]
git-tree-sha1 = "04c968137612c4a5629fa531334bb81ad5680f00"
Expand Down Expand Up @@ -1438,6 +1566,12 @@ git-tree-sha1 = "58e6353e72cde29b90a69527e56df1b5c3d8c437"
uuid = "ce78b400-467f-4804-87d8-8f486da07d0a"
version = "1.1.0"

[[deps.Sobol]]
deps = ["DelimitedFiles", "Random"]
git-tree-sha1 = "5a74ac22a9daef23705f010f72c81d6925b19df8"
uuid = "ed01d8cd-4d21-5b2a-85b4-cc3bdc58bad4"
version = "1.5.0"

[[deps.Sockets]]
uuid = "6462fe0b-24de-5631-8697-dd941f90decc"

Expand Down Expand Up @@ -1552,6 +1686,29 @@ deps = ["LinearAlgebra", "SparseArrays"]
uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
version = "1.10.0"

[[deps.StatsAPI]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "1ff449ad350c9c4cbc756624d6f8a8c3ef56d3ed"
uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0"
version = "1.7.0"

[[deps.StatsBase]]
deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"]
git-tree-sha1 = "5cf7606d6cef84b543b483848d4ae08ad9832b21"
uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
version = "0.34.3"

[[deps.StatsFuns]]
deps = ["HypergeometricFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"]
git-tree-sha1 = "cef0472124fab0695b58ca35a77c6fb942fdab8a"
uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c"
version = "1.3.1"
weakdeps = ["ChainRulesCore", "InverseFunctions"]

[deps.StatsFuns.extensions]
StatsFunsChainRulesCoreExt = "ChainRulesCore"
StatsFunsInverseFunctionsExt = "InverseFunctions"

[[deps.StrideArraysCore]]
deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"]
git-tree-sha1 = "f35f6ab602df8413a50c4a25ca14de821e8605fb"
Expand Down
1 change: 1 addition & 0 deletions core/Project.toml
Original file line number Diff line number Diff line change
Expand Up @@ -21,6 +21,7 @@ FiniteDiff = "6a86dc24-6348-571c-b903-95158fe2bd41"
ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
Graphs = "86223c79-3864-5bf0-83f7-82e725a168b6"
HiGHS = "87dc4568-4c63-4d18-b0c0-bb2238e4078b"
Integrals = "de52edbc-65ea-441a-8357-d3a637375a31"
IterTools = "c8e1da08-722c-5040-9ed9-7db0dc04731e"
JuMP = "4076af6c-e467-56ae-b986-b466b2749572"
Legolas = "741b9549-f6ed-4911-9fbf-4a1c0c97f0cd"
Expand Down
3 changes: 3 additions & 0 deletions core/src/Ribasim.jl
Original file line number Diff line number Diff line change
Expand Up @@ -17,6 +17,9 @@ module Ribasim
# Algorithms for solving ODEs.
using OrdinaryDiffEq: OrdinaryDiffEq, OrdinaryDiffEqRosenbrockAdaptiveAlgorithm, get_du

# Algorithms for solving explicit integral problems
using Integrals: IntegralProblem, solve, QuadGKJL

# Interface for defining and solving the ODE problem of the physical layer.
using SciMLBase:
init,
Expand Down
Loading

0 comments on commit 0780763

Please sign in to comment.