deploy: 98014f3

.gitignore

@@ -0,0 +1,8 @@
+/.quarto/
+/_site/
+/site_libs/
+python/reference/
+python/data/
+*.html
+/Manifest.toml
+objects.json

.nojekyll

@@ -1 +0,0 @@
-46045333

Project.toml

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+[deps]
+Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
+DocumenterMarkdown = "997ab1e6-3595-5248-9280-8efb232c3433"
+InteractiveUtils = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
+JSON3 = "0f8b85d8-7281-11e9-16c2-39a750bddbf1"
+OrderedCollections = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
+
+[compat]
+JSON3 = "1.12"
+julia = "1.9"

_extensions/quarto-ext/include-code-files/_extension.yml

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+title: Include Code Files
+author: Bruno Beaufils
+version: 1.0.0
+quarto-required: ">=1.2"
+contributes:
+  filters:
+    - include-code-files.lua

_extensions/quarto-ext/include-code-files/include-code-files.lua

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+--- include-code-files.lua – filter to include code from source files
+---
+--- Copyright: © 2020 Bruno BEAUFILS
+--- License:   MIT – see LICENSE file for details
+
+--- Dedent a line
+local function dedent (line, n)
+  return line:sub(1,n):gsub(" ","") .. line:sub(n+1)
+end
+
+--- Filter function for code blocks
+local function transclude (cb)
+  if cb.attributes.include then
+    local content = ""
+    local fh = io.open(cb.attributes.include)
+    if not fh then
+      io.stderr:write("Cannot open file " .. cb.attributes.include .. " | Skipping includes\n")
+    else
+      local number = 1
+      local start = 1
+
+      -- change hyphenated attributes to PascalCase
+      for i,pascal in pairs({"startLine", "endLine"})
+      do
+         local hyphen = pascal:gsub("%u", "-%0"):lower()
+         if cb.attributes[hyphen] then
+            cb.attributes[pascal] = cb.attributes[hyphen]
+            cb.attributes[hyphen] = nil
+         end
+      end
+
+      if cb.attributes.startLine then
+        cb.attributes.startFrom = cb.attributes.startLine
+        start = tonumber(cb.attributes.startLine)
+      end
+      for line in fh:lines ("L")
+      do
+        if cb.attributes.dedent then
+          line = dedent(line, cb.attributes.dedent)
+        end
+        if number >= start then
+          if not cb.attributes.endLine or number <= tonumber(cb.attributes.endLine) then
+            content = content .. line
+          end
+        end
+        number = number + 1
+      end
+      fh:close()
+    end
+    -- remove key-value pair for used keys
+    cb.attributes.include = nil
+    cb.attributes.startLine = nil
+    cb.attributes.endLine = nil
+    cb.attributes.dedent = nil
+    -- return final code block
+    return pandoc.CodeBlock(content, cb.attr)
+  end
+end
+
+return {
+  { CodeBlock = transclude }
+}

_quarto.yml

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+project:
+  type: website
+  resources:
+    - schema/*.schema.json
+
+website:
+  title: "Ribasim"
+  page-navigation: true
+  navbar:
+    logo: https://user-images.githubusercontent.com/4471859/224825908-bee7e044-bc6b-4561-8b08-5d330cce3ed5.png
+    left:
+      - text: "Julia core"
+        file: core/index.qmd
+      - text: "Python tooling"
+        file: python/index.qmd
+      - text: "QGIS plugin"
+        file: qgis/index.qmd
+      - text: "Coupled models"
+        file: couple/index.qmd
+      - text: "Contributing"
+        file: contribute/index.qmd
+    right:
+      - icon: github
+        href: https://github.com/Deltares/Ribasim
+        aria-label: GitHub
+
+  sidebar:
+    - title: "Julia core"
+      contents:
+        - core/index.qmd
+        - core/usage.qmd
+        - core/equations.qmd
+        - core/allocation.qmd
+        - core/numerics.qmd
+        - build/index.md
+    - title: "Python tooling"
+      contents:
+        - python/index.qmd
+        - python/examples.ipynb
+        - python/reference/index.qmd
+    - title: "Coupled models"
+      contents:
+        - couple/index.qmd
+        - couple/modflow.qmd
+        - couple/modflow-demo.qmd
+    - title: "Contributing"
+      contents:
+        - contribute/index.qmd
+        - contribute/core.qmd
+        - contribute/python.qmd
+        - contribute/addnode.qmd
+        - contribute/release.qmd
+
+format:
+  html:
+    theme: cosmo
+    css: assets/styles.css
+    toc: true
+
+bibliography: references.bib
+number-sections: true
+
+quartodoc:
+  style: pkgdown
+  dir: python/reference
+  title: API Reference
+  package: ribasim
+  sections:
+    - title: Model
+      desc: The Model class represents an entire Ribasim model.
+      contents:
+        - Model
+    - title: Network
+      desc: The Node and Edge database layers define the network layout.
+      contents:
+        - Node
+        - Edge
+    - title: Node types
+      desc: Available node types to model different situations.
+      contents:
+        - Basin
+        - FractionalFlow
+        - TabulatedRatingCurve
+        - Pump
+        - Outlet
+        - User
+        - LevelBoundary
+        - FlowBoundary
+        - LinearResistance
+        - ManningResistance
+        - Terminal
+        - DiscreteControl
+        - PidControl
+    - title: Utility functions
+      desc: Collection of utility functions.
+      contents:
+        - utils.geometry_from_connectivity
+        - utils.connectivity_from_geometry

build/assets/Documenter.css

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+div.wy-menu-vertical ul.current li.toctree-l3 a {
+  font-weight: bold;
+}
+
+a.documenter-source {
+  float: right;
+}
+
+.documenter-methodtable pre {
+    margin-left: 0;
+    margin-right: 0;
+    margin-top: 0;
+    padding: 0;
+}
+
+.documenter-methodtable pre.documenter-inline {
+    display: inline;
+}

build/assets/mathjaxhelper.js

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+MathJax.Hub.Config({
+  "tex2jax": {
+    inlineMath: [['$','$'], ['\\(','\\)']],
+    processEscapes: true
+  }
+});
+MathJax.Hub.Config({
+  config: ["MMLorHTML.js"],
+  jax: [
+    "input/TeX",
+    "output/HTML-CSS",
+    "output/NativeMML"
+  ],
+  extensions: [
+    "MathMenu.js",
+    "MathZoom.js",
+    "TeX/AMSmath.js",
+    "TeX/AMSsymbols.js",
+    "TeX/autobold.js",
+    "TeX/autoload-all.js"
+  ]
+});
+MathJax.Hub.Config({
+  TeX: { equationNumbers: { autoNumber: "AMS" } }
+});