v1.0.0alpha7

What's Changed

• Fixed some bugs in conversion, downloading, extracting
• Fixed CoverageStats for .cram files
• Housekeeping (renaming, documentation, etc.)

Full Changelog: v1.0.0alpha6...v1.0.0alpha7

v1.0.0alpha6

Features

• Downloader: now loading the CA bundle
• MicroarrayConverter: now supports json metadata as first line in the template, prepended by ##
• Added some shortcuts:
  • Ctrl+Shift+R: reload the current file file ignoring the .pickle file
  • Ctrl+R: reload the file
  • Ctrl+G: open genome directory in a file explorer
  • Ctrl+D: open the directory where the current loaded file is stored

Bugfix

• Converter: fixed a bug that was ordering incorrectly autosome sequences in some cases
• Fixed MtDNA length sequence for CRS and RSRS
• Orderer: deprecated and removed the class

Full Changelog: v1.0.0alpha5...v1.0.0alpha6

v1.0.0alpha5

[Bugs]

• Fixed Tools -> Create launcher on desktop (for windows)
• The software is no longer crashing after starting VCF conversion
• DoubleHelix is able to start even without doublehelix-external package installed

[Features]

• Added support to monitor download
• Added UnitPrefix wherever possible to have more readable quantities displayed
• DoubleHelix is now not trying to pull doublehelix-external on non-windows OSs

Full Changelog: v1.0.0alpha4...v1.0.0alpha5

v1.0.0alpha4

• Fixed several bugs in Downloader, Decompressor, BGzip, GZip and added unit-tests
  Full Changelog: v1.0.0alpha3...v1.0.0alpha4

v1.0.0alpha3

• All conversion and variant calling can be now started and killed from the GUI
• Minor fixes

Full Changelog: v1.0.0alpha2...v1.0.0alpha3

v1.0.0alpha2

Full Changelog: v1.0.0alpha1...v1.0.0alpha2

v1.0.0alpha1

First release