corrected issues with import_qc, caused by trying to update the analy…

…sis_summary_json field
EBI-Metagenomics · Sep 13, 2023 · 17f267c · 17f267c
1 parent cd0345f
commit 17f267c
Showing 1 changed file with 3 additions and 7 deletions.
diff --git a/emgapianns/management/commands/import_qc.py b/emgapianns/management/commands/import_qc.py
@@ -85,17 +85,13 @@ def import_qc(reader, job, emg_db):
                     job=job, var=var,
                     defaults={'var_val_ucv': row[1]}
                 )
-
-                analysis_job = AnalysisJob.objects.get(job_id=job)
-                analysis_summary = analysis_job.analysis_summary_json or []
+                analysis_summary = job.analysis_summary_json or []
                 analysis_summary.append({
                     'key': job_ann.var.var_name,
                     'value': job_ann.var_val_ucv,
                 })
-
-                # Update analysis_summary_json with the modified array
-                analysis_job.analysis_summary_json = analysis_summary
-                analysis_job.save()
+                job.analysis_summary_json = analysis_summary
+                job.save()
 
             anns.append(job_ann)
         logger.info("Total %d Annotations for Run: %s" % (len(anns), job))