update 1.2.7

Documentation/EGADS Algorithm Handbook - LATEX/cover/alg_cover.tex

@@ -24,7 +24,7 @@
 \setlength{\voffset}{.0cm}
 
 \logoeufar
-\title{EUFAR, Olivier Henry}{}{EGADS Lineage Algorithm Handbook}{Version 1.2.6}
+\title{EUFAR, Olivier Henry}{}{EGADS Lineage Algorithm Handbook}{Version 1.2.7}
 %\author{}{}
 
 

Documentation/changelog.txt

@@ -7,11 +7,30 @@ To do list:
   - check feasability of an online algorithm database.
   - add function to create algorithm template.
   - add function to add a folder, somewhere on the hard drive, to the list of algorithms.
+  - add new tests to test each function of each class
 
 To fix list:
 ------------
 
 
+July 15 2020, Release version 1.2.7
+==================================
+The results of the following functions get_variable_list(), get_group_list() and get_dimension_list() for Hdf and NetCdf classes is the same type whatever the option used in each function. Now if details = True, get_variable_list() and get_group_list() return a list of string, each string is composed of the path to the group/variable + group/variable name. get_dimension_list() returns a dictionary of keys, composed of the path to the dimension + the dimension name, and values composed of the size of the dimension. It is the same schema than the one before 1.2.0.
+
+
+  MODIFIED:
+	- if an attribute is empty but exist in a file, it is now kept in EgadsData, and it can be written to a new file.
+	- in NasaAmes class, scale_factor and missing value have been removed from EgadsData metadata as they don't exist in NA file.
+	- get_variable_list() in Hdf and NetCdf classes returns a list of string. If details = True, each string is composed of the path to the variable + the variable name.
+	- get_group_list() in Hdf and NetCdf classes returns a list of string. If details = True, each string is composed of the path to the group + the group name.
+	- get_dimension_list() in Hdf and NetCdf classes returns a dictionary with keys as dimension name and values as dimension size. If details = True, each key is composed of the path to the dimension + the dimension name.
+
+  FIXED:
+    - in Hdf file, attribute created by H5py ['DIMENSION_LABELS', 'NAME', 'CLASS', 'REFERENCE_LIST', 'DIMENSION_LIST'] were transfered to EgadsData. It has been fixed.
+	- with Hdf file, variables at the root of the file have a path equal to '/', like netcdf file.
+	- test units have been fixed.
+
+
 May 7 2020, Release version 1.2.6
 =================================
   FIXED:

PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 1.2
 Name: egads-lineage
-Version: 1.2.6
+Version: 1.2.7
 Summary: EGADS: EUFAR General Airborne Data-processing Software
 Home-page: https://github.com/EUFAR/egads/tree/Lineage
 Author: EUFAR, Olivier Henry

README.md

@@ -1,7 +1,7 @@
 Version:
 -------
 
-EGADS Lineage 1.2.6
+EGADS Lineage 1.2.7
 
 
 Developments:
@@ -38,7 +38,7 @@ Features:
 * Fully documented algorithms
 * I/O routines for common file formats:
   * NetCDF
-  * Hdf
+  * Hdf5
   * NASA Ames
   * CSV
   * ASCII

doc/source/conf.py

@@ -48,9 +48,9 @@
 # built documents.
 #
 # The short X.Y version.
-version = '1.2.6'
+version = '1.2.7'
 # The full version, including alpha/beta/rc tags.
-release = '1.2.6'
+release = '1.2.7'
 
 # The language for content autogenerated by Sphinx. Refer to documentation
 # for a list of supported languages.

egads/_version.py

@@ -1,2 +1,2 @@
-__version__ = '1.2.6'
+__version__ = '1.2.7b'
 __branch__ = 'Lineage'

egads/core/egads_core.py

@@ -34,6 +34,8 @@ def __new__(cls, value, units='', variable_metadata={}, dtype=None, **attrs):
         :param VariableMetadata variable_metadata:
             Optional - VariableMetadata dictionary object containing relevant metadata
             for the current EgadsData instance.
+        :param string dtype:
+            Optional - String representation of the data format.
         :param **attrs:
             Optional - Keyword/value pairs of additional metadata which will be added into
             the existing variable_metadata object.
@@ -78,9 +80,11 @@ def __init__(self, value, units='', variable_metadata=None, dtype='float64', **a
         :param string units:
             Optional - String representation of units to be used for current EgadsData instance, e.g.
             'm/s', 'kg', 'g/cm^3', etc.            
-        :param VariableMetadata variable_metadata: 
+        :param VariableMetadata variable_metadata:
             Optional - VariableMetadata dictionary object containing relevant metadata
             for the current EgadsData instance.
+        :param string dtype:
+            Optional - String representation of the data format.
         :param **attrs:
             Optional - Keyword/value pairs of additional metadata which will be added into
             the existing variable_metadata object.