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F/rayleigh damping#726

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mchurchf wants to merge 51 commits intoExawind:masterExawind/nalu-wind:masterfrom mchurchf:f/RayleighDampingmchurchf/nalu-wind:f/RayleighDampingCopy head branch name to clipboard

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Commits on May 7, 2020

• First commit of a new branch for getting upgraded ABL wall BC into mainline nalu-wind.

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• Updating NaluParsing.

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Commits on May 8, 2020

• The beginnings of the ABL wall fluxes computation in ngp_algorithms.

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• Trying to get the ABLWallFluxes load method to compile.

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Commits on May 13, 2020

• Basic framework for new ABL BC in place.

  

  Matt Churchfield

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Commits on May 15, 2020

• Connecting EnthalpyEquationSystem with the ABL wall model.

  

  Matt Churchfield

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Commits on May 19, 2020

• Progress commit. Load function complete, fixed small issue in ScalarFaceFluxBCElemKernel.

  

  Matt Churchfield

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Commits on Jun 2, 2020

• Fixing a problem with the psi_h function for unstable conditions.

  

  Matt Churchfield

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• Adding a checkpoint commit for this upgraded wall bc.

  

  Matt Churchfield

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Commits on Jun 12, 2020

• Checkpoint commit.

  

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Commits on Jun 19, 2020

• add in a rayleigh damping option

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Commits on Jun 22, 2020

• This ties all components together to do wall-modeling outlined by Basu with wall shear stress fluctuations of Moeng or Schumann or completely local.

  

  Matt Churchfield

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• Merging with exawind/master

  

  Matt Churchfield

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• Updating the ablNeutralEdge input file to reflect new BC input needs.

  

  Matt Churchfield

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Commits on Jun 24, 2020

• Fixed a sign error on the applied wall shear stresses.

  

  Matt Churchfield

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Commits on Jun 25, 2020

• Fixes for the flux algorithms 1 and 2 to include L calculation each iteration; fix for the fluctuating surface temperature flux component to deal properly with zero divided by zero sitations.

  

  Matt Churchfield

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• Added logic to deal with zero divided by zero fluctuation stress/flux conditions.

  

  Matt Churchfield

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• Merge remote-tracking branch 'exawind/master' into f/ABLWallBCUpgrade

  

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Commits on Sep 4, 2020

• Merged with current state of exawind master.

  

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Commits on Sep 8, 2020

• Merge remote-tracking branch 'exawind/master' into f/ABLWallBCUpgrade

  

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Commits on Sep 17, 2020

• Merge remote-tracking branch 'exawind/master' into f/ABLWallBCUpgrade

  

  Matt Churchfield

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Commits on Sep 21, 2020

• Updated to give the option to use reference or surface temperature in calculating fluctuating flux.

  

  Matt Churchfield

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• Updating regression tests.

  

  Matt Churchfield

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• Merge remote-tracking branch 'exawind/master' into f/ABLWallBCUpgrade

  

  Matt Churchfield

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Commits on Sep 28, 2020

• Fixed a syntax issue in NaluParsing.h

  

  Matt Churchfield

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• Merge remote-tracking branch 'exawind/master' into f/ABLWallBCUpgrade

  

  Matt Churchfield

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• Updated the gold value of wall distance to be used by wall functions in the unit test.

  

  Matt Churchfield

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Commits on Oct 1, 2020

• Update include/edge_kernels/MomentumABLWallShearStressEdgeKernel.h

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• Update include/ngp_algorithms/WallFricVelAlgDriver.h

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• Update include/wind_energy/MoninObukhov.h

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• Update src/ngp_algorithms/ABLWallFluxesAlg.C

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• Update src/ngp_algorithms/ABLWallFluxesAlg.C

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• Update src/ngp_algorithms/ABLWallFluxesAlg.C

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Commits on Oct 9, 2020

• Reduced redundant code by eliminating the two flux/stress functions and having just a single function that can operate in both alg 1 and 2 modes.

  

  Matt Churchfield

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• Adding some Doxygen style comments to explain the code.

  

  Matt Churchfield

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• Update to make the new flux/stress BC work for both element and edge based.

  

  Matt Churchfield

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• Small typo fix.

  

  Matt Churchfield

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• Update src/LowMachEquationSystem.C

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• Update src/kernel/ScalarFaceFluxBCElemKernel.C

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• Update src/ngp_algorithms/WallFuncGeometryAlg.C

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• Update src/wind_energy/BdyLayerStatistics.C

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Commits on Oct 13, 2020

• Update to WallFuncGeometryAlg to make distance from wall of velocity sampling a parameter that can be modified in the code.

  

  Matt Churchfield

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• Merging with changes made through github website pull request suggested edits.

  

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• Merging with current exawind/master

  

  Matt Churchfield

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• Merging Robert's Rayleigh damping with the updated lower BC code, which is up to date with exawind/master.

  

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Commits on Oct 14, 2020

• Initial clean up to better match main exawind master.

  

  Matt Churchfield

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• Small updates to better match upgraded ABL surface BC branch and master.

  

  Matt Churchfield

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Commits on Oct 15, 2020

• Clean up to integrate Robert's gravity wave implementation into new flux BC code and nalu-wind master.

  

  Matt Churchfield

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• Generalized the capping inversion aux function to take user inputs instead of hard coding.

  

  Matt Churchfield

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• Commit for updates to mesh

  

  Matt Churchfield

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• Removing Rayleigh damping from ablNeutralEdge test case. Will add a dedicated case...

  

  Matt Churchfield

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