Bumped ruff

.pre-commit-config.yaml

@@ -1,9 +1,9 @@
 repos:
   - repo: https://github.com/astral-sh/ruff-pre-commit
     # Ruff version.
-    rev: v0.8.3
+    rev: v0.9.3
     hooks:
       # Run the linter.
       - id: ruff
       # Run the formatter.
-      - id: ruff-format
+      - id: ruff-format

src/pynxtools_apm/utils/generate_synthetic_data.py

@@ -248,9 +248,9 @@ def place_atoms_from_periodic_table(self):
         for idx in self.nrm_composition:
             accept_reject.append(idx[3])
         accept_reject = np.cumsum(accept_reject)
-        assert (
-            self.xyz != []
-        ), "self.xyz must not be an empty dataset, create a geometry first!"
+        assert self.xyz != [], (
+            "self.xyz must not be an empty dataset, create a geometry first!"
+        )
         # print("Accept/reject sampling m/q values for "
         #       + str(np.shape(self.xyz)[0]) + " ions")