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| # For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag. | ||
| # https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions | ||
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
| on: | ||
| push: | ||
| branches: | ||
| - main | ||
| - master | ||
| - pre-release | ||
| branches: [main, master] | ||
| pull_request: | ||
| branches: | ||
| - main | ||
| - master | ||
| - pre-release | ||
| branches: [main, master] | ||
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| name: R-CMD-check | ||
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| permissions: read-all | ||
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| jobs: | ||
| R-CMD-check: | ||
| runs-on: ${{ matrix.os }} | ||
| name: ${{ matrix.os }} (R ${{ matrix.r }}) | ||
| runs-on: ${{ matrix.config.os }} | ||
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| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
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| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| r: ['4.3.3'] | ||
| os: [ubuntu-latest, macOS-latest, windows-latest] | ||
| config: | ||
| - {os: macos-latest, r: 'release'} | ||
| - {os: windows-latest, r: 'release'} | ||
| - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | ||
| - {os: ubuntu-latest, r: 'release'} | ||
| - {os: ubuntu-latest, r: 'oldrel-1'} | ||
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| env: | ||
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | ||
| R_REMOTES_UPGRADE: never | ||
| VDIFFR_RUN_TESTS: true | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| _R_CHECK_LENGTH_1_CONDITION_: TRUE #deprecated from R 4.2.0 | ||
| _R_CHECK_MATRIX_DATA_: TRUE # only works from R 4.2.0 onwards | ||
| R_KEEP_PKG_SOURCE: yes | ||
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| steps: | ||
| - uses: actions/checkout@v4 | ||
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| - uses: r-lib/actions/setup-pandoc@v2 | ||
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| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| r-version: ${{ matrix.r }} | ||
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| - name: Install system dependencies on macOS | ||
| if: runner.os == 'macOS' | ||
| run: | | ||
| # see https://github.com/orgs/Homebrew/discussions/4612 | ||
| unset HOMEBREW_NO_INSTALL_FROM_API | ||
| brew update | ||
| brew install --cask xquartz | ||
| brew install libarchive | ||
| shell: bash | ||
|
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| - name: Install system dependencies on macOS specific to R devel | ||
| if: runner.os == 'macOS' && matrix.r == 'devel' | ||
| run: | | ||
| # ragg requires harfbuzz fribidi | ||
| # The dependencies of the two R packages below are required for compiling from source on Ubuntu, but macOS seems fine without them | ||
| # credentials (dependency of usethis) requires libgit2 | ||
| # curl (dependency of usethis) requires openssl | ||
| brew install harfbuzz fribidi libgit2 openssl curl | ||
| shell: bash | ||
| r-version: ${{ matrix.config.r }} | ||
| http-user-agent: ${{ matrix.config.http-user-agent }} | ||
| use-public-rspm: true | ||
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| - name: Install system dependencies on linux | ||
| if: runner.os == 'Linux' | ||
| run: | | ||
| # ragg requires libharfbuzz-dev libfribidi-dev | ||
| # credentials (dependency of usethis) requires libgit2-dev | ||
| # curl (dependency of usethis) requires libcurl4-openssl-dev | ||
| # libicu (dependency of igraph or stringi...) requires libicu libicu-dev | ||
| sudo apt install libharfbuzz-dev libfribidi-dev libgit2-dev libcurl4-openssl-dev libicu* | ||
| shell: bash | ||
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| - name: Install dependencies | ||
| run: | | ||
| install.packages("remotes") | ||
| remotes::install_deps(dependencies = TRUE) | ||
| remotes::install_cran("rcmdcheck") | ||
| shell: Rscript {0} | ||
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| - name: Check | ||
| if: runner.os != 'Windows' | ||
| env: | ||
| _R_CHECK_CRAN_INCOMING_REMOTE_: false | ||
| run: | | ||
| options(crayon.enabled = TRUE) | ||
| rcmdcheck::rcmdcheck( | ||
| args = c("--no-manual", "--as-cran", "--ignore-vignettes"), | ||
| build_args = c("--no-build-vignettes"), | ||
| error_on = "warning", | ||
| check_dir = "check") | ||
| shell: Rscript {0}" | ||
|
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| - name: Check | ||
| if: runner.os == 'Windows' | ||
| env: | ||
| _R_CHECK_CRAN_INCOMING_REMOTE_: false | ||
| run: | | ||
| options(crayon.enabled = TRUE) | ||
| rcmdcheck::rcmdcheck( | ||
| args = c("--no-manual", "--as-cran", "--ignore-vignettes"), | ||
| build_args = c("--no-build-vignettes"), | ||
| error_on = "warning", | ||
| check_dir = "check") | ||
| shell: Rscript {0} | ||
| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: any::rcmdcheck | ||
| needs: check | ||
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| - name: Upload check results | ||
| if: failure() | ||
| uses: actions/upload-artifact@main | ||
| - uses: r-lib/actions/check-r-package@v2 | ||
| with: | ||
| name: ${{ runner.os }}-r${{ matrix.config.r }}-results | ||
| path: check | ||
| upload-snapshots: true | ||
| build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")' |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,61 @@ | ||
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
| on: | ||
| push: | ||
| branches: [main, master] | ||
| pull_request: | ||
| branches: [main, master] | ||
|
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| name: test-coverage | ||
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| permissions: read-all | ||
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| jobs: | ||
| test-coverage: | ||
| runs-on: ubuntu-latest | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
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| steps: | ||
| - uses: actions/checkout@v4 | ||
|
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| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| use-public-rspm: true | ||
|
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| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: any::covr, any::xml2 | ||
| needs: coverage | ||
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| - name: Test coverage | ||
| run: | | ||
| cov <- covr::package_coverage( | ||
| quiet = FALSE, | ||
| clean = FALSE, | ||
| install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package") | ||
| ) | ||
| covr::to_cobertura(cov) | ||
| shell: Rscript {0} | ||
|
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| - uses: codecov/codecov-action@v4 | ||
| with: | ||
| fail_ci_if_error: ${{ github.event_name != 'pull_request' && true || false }} | ||
| file: ./cobertura.xml | ||
| plugin: noop | ||
| disable_search: true | ||
| token: ${{ secrets.CODECOV_TOKEN }} | ||
|
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| - name: Show testthat output | ||
| if: always() | ||
| run: | | ||
| ## -------------------------------------------------------------------- | ||
| find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true | ||
| shell: bash | ||
|
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| - name: Upload test results | ||
| if: failure() | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: coverage-test-failures | ||
| path: ${{ runner.temp }}/package |