Test pipeline i av h2

.gitignore

@@ -5,3 +5,9 @@ runner.env
 **/.cache
 **/.config
 .server
+<<<<<<< Updated upstream
+/output/
+/scripts/00_auk_filter/input/original/
+scripts/00_auk_filter_v2/input/original/
+=======
+>>>>>>> Stashed changes

Putumayo/Borugo_S1_covariables_sitio_5D.txt

@@ -0,0 +1 @@
+O1	O2	O3	O4	O5	O6	O7	O8	O9	O10	B	H	E0	0	0	0	1	1	1	0	0	NA	19.91	42	3310	0	0	0	1	1	0	0	0	NA	11.98	37	2330	0	1	0	0	0	0	0	0	NA	35.01	31	2590	0	0	0	1	0	0	0	0	NA	14.81	37	2501	1	1	0	1	0	0	0	0	NA	37.74	31	2660	1	0	0	0	0	0	0	0	0	17.08	28	1760	0	1	0	0	0	0	0	0	0	10.28	28	2380	0	0	0	0	0	0	0	0	0	28.49	25	2670	0	1	0	0	0	0	0	0	0	43.59	22	2450	0	0	0	0	0	0	0	0	0	51.52	8	3100	0	0	0	0	0	0	0	0	0	16.42	25	1710	0	1	0	1	0	0	0	0	1	29.25	11	2500	1	1	0	0	0	1	1	1	0	53.03	5	2120	0	0	0	0	0	0	0	0	0	37.93	25	2331	1	0	1	1	1	1	1	0	0	30.38	25	1870	0	1	1	1	1	0	1	1	1	57.65	14	2480	0	0	0	0	0	0	0	0	1	60.76	8	2471	1	0	1	0	0	0	1	1	1	70.67	5	1930	0	0	0	0	0	0	0	0	0	73.03	5	2570	0	0	0	0	0	0	0	0	0	68.50	5	2350	0	0	0	0	1	1	0	1	1	45.10	8	2120	1	1	1	1	1	1	1	1	1	62.56	8	2431	1	0	1	1	0	1	1	1	NA	29.34	31	4001	1	1	0	1	1	1	1	1	0	46.70	17	3780	0	0	0	0	0	1	1	1	0	71.33	14	3400	0	0	0	0	0	0	0	0	NA	25.48	37	3200	0	0	0	1	0	1	1	0	1	79.45	17	3841	1	0	0	0	0	1	1	1	1	79.45	17	4260	1	1	1	1	0	0	0	0	0	56.23	20	3760	1	0	0	0	0	0	0	0	0	42.65	20	3341	1	1	1	1	1	1	0	0	1	49.06	22	4061	1	1	0	1	1	1	1	1	1	48.03	34	4090	0	0	0	0	1	0	0	0	0	37.18	22	399NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9.91	42	4110	0	0	0	0	0	0	0	0	0	76.33	14	9200	0	0	0	0	0	0	0	0	0	78.50	25	8570	0	0	0	0	0	0	0	0	NA	31.14	31	6451	1	0	0	0	0	0	0	0	0	24.63	42	6961	1	1	1	1	1	1	1	0	0	50.86	34	5200	1	1	1	0	1	1	0	0	0	12.83	37	7480	0	1	0	0	0	0	0	0	0	70.86	8	7910	0	0	0	0	0	0	1	0	0	26.14	14	7890	0	0	0	0	0	0	0	0	0	76.61	5	878

Putumayo/Borugo_S1_sin_covariables_1D.txt

@@ -0,0 +1 @@
+O1	O2	O3	O4	O5	O6	O7	O8	O9	O10	O11	O12	O13	O14	O15	O16	O17	O18	O19	O20	O21	O22	O23	O24	O25	O26	O27	O28	O29	O30	O31	O32	O33	O34	O35	O36	O37	O38	O39	O40	O41	O42	O43	O44	O45	O46	O47	O48	O49	O50	O51	O52	O530	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	NA	NA0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	1	0	0	0	1	1	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	00	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	1	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	1	1	1	1	0	1	1	0	0	0	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	NA1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	1	0	1	1	1	0	0	0	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	00	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	1	0	1	0	10	0	0	0	0	0	0	0	1	1	1	0	1	0	1	1	0	1	1	1	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	01	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	1	1	1	0	0	NA	NA	NA	NA	NA	NA	NA	NA0	0	1	0	0	1	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	1	1	1	0	1	0	1	0	0	0	0	0	1	1	0	0	NA	NA	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	NA	NA	NA	NA	NA	NA0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	1	0	0	0	0	0	1	1	0	NA	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	1	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA0	0	1	0	0	0	0	1	0	0	1	1	1	0	1	1	0	1	1	0	0	1	1	1	0	0	1	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	NA	NA	NA	NA0	0	1	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	1	0	1	1	0	1	1	0	1	0	0	0	1	0	0	1	0	0	1	1	0	1	0	0	1	0	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NANA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	1	1	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA

Putumayo/Borugo_S1_sin_covariables_5D.txt

@@ -0,0 +1 @@
+O1	O2	O3	O4	O5	O6	O7	O8	O9	O100	0	0	0	1	1	1	0	0	NA0	0	0	0	1	1	0	0	0	NA0	0	1	0	0	0	0	0	0	NA0	0	0	0	1	0	0	0	0	NA1	1	1	0	1	0	0	0	0	NA0	1	0	0	0	0	0	0	0	00	0	1	0	0	0	0	0	0	00	0	0	0	0	0	0	0	0	00	0	1	0	0	0	0	0	0	00	0	0	0	0	0	0	0	0	00	0	0	0	0	0	0	0	0	00	0	1	0	1	0	0	0	0	10	1	1	0	0	0	1	1	1	00	0	0	0	0	0	0	0	0	01	1	0	1	1	1	1	1	0	00	0	1	1	1	1	0	1	1	10	0	0	0	0	0	0	0	0	11	1	0	1	0	0	0	1	1	10	0	0	0	0	0	0	0	0	00	0	0	0	0	0	0	0	0	00	0	0	0	0	1	1	0	1	10	1	1	1	1	1	1	1	1	11	1	0	1	1	0	1	1	1	NA1	1	1	0	1	1	1	1	1	00	0	0	0	0	0	1	1	1	00	0	0	0	0	0	0	0	0	NA0	0	0	0	1	0	1	1	0	11	1	0	0	0	0	1	1	1	10	1	1	1	1	0	0	0	0	00	1	0	0	0	0	0	0	0	01	1	1	1	1	1	1	0	0	11	1	1	0	1	1	1	1	1	10	0	0	0	0	1	0	0	0	0NA	NA	NA	NA	NA	NA	NA	NA	NA	NA0	0	0	0	0	0	0	0	0	00	0	0	0	0	0	0	0	0	00	0	0	0	0	0	0	0	0	NA1	1	0	0	0	0	0	0	0	01	1	1	1	1	1	1	1	0	00	1	1	1	0	1	1	0	0	00	0	1	0	0	0	0	0	0	00	0	0	0	0	0	0	1	0	00	0	0	0	0	0	0	0	0	0

Putumayo/GTAS_OCC1.R

@@ -0,0 +1,26 @@
+#### Una temporada sin covariables ########################################################################################### 
+
+library(unmarked)
+data<-read.table("Borugo_S1_sin_covariables_5D.txt",header=TRUE)
+str(data)
+data1<-unmarkedFrameOccu(y=data,siteCovs=NULL,obsCovs=NULL)
+data1
+summary(data1)  
+plot(data1)
+model<-occu(~1 ~ 1,data1)
+model
+summary(model)
+coef(model) 						
+resultados<-plogis(coef(model))	
+(psiSE<-backTransform(model,type="state")) 
+(pSE<-backTransform(model,type="det"))
+(ciPsi<-confint(psiSE))
+(ciP<-confint(pSE))
+Tabla_res<-rbind(psi=c(resultados[1],ciPsi),p=c(resultados[2],ciP))
+colnames(Tabla_res)<-c("Resultado","ICbajo","ICalto")
+Tabla_res
+plot(1:2,Tabla_res[,"Resultado"],xlim=c(0.5,2.5),ylim=0:1,col=c("blue","darkgreen"),pch=16,cex=2,cex.lab=1.5,xaxt="n",ann=F)
+axis(1, 1:2, labels=c(expression(psi),expression(italic(p))),cex.axis=1.5)
+arrows(1:2,Tabla_res[,"ICbajo"],1:2,Tabla_res[,"ICalto"],angle=90,length=0.1,code=3,col=c("blue","darkgreen"),lwd=2)
+
+##############################################################################################################################

Putumayo/GTAS_OCC2.R

@@ -0,0 +1,117 @@
+#### Una temporada con covariables de sitio ########################################################################################### 
+
+dir_work<- this.path::this.path() %>% dirname()
+
+setwd(dir_work)
+
+library("unmarked")
+data<-read.table("Venado_S3_covariables_sitio_10D.txt",header=TRUE)
+
+B.mean <- mean(data$B)
+B.sd <- sd(data$B)
+B.z <- (data$B - B.mean)/B.sd
+H.mean <- mean(data$H)
+H.sd <- sd(data$H)
+H.z <- (data$H - H.mean)/H.sd
+E.mean <- mean(data$E)
+E.sd <- sd(data$E)
+E.z <- (data$E - E.mean)/E.sd
+cor(B.z,H.z)
+cor(B.z,E.z)
+cor(H.z,E.z)
+
+data.umf <- unmarkedFrameOccu(y=cbind(data$O1,data$O2,data$O3,data$O4,data$O5,data$O6,data$O7,data$O8,data$O9,data$O10,data$O11),
+                              siteCovs=data.frame(BOSQUE=B.z,HUELLA=H.z,ELEVAC=E.z),
+                              obsCovs=NULL)
+summary(data.umf)
+plot(data.umf)
+
+model<-occu(~1 ~ 1,data.umf)
+model
+summary(model)
+coef(model) 						
+resultados<-plogis(coef(model))	
+(psiSE<-backTransform(model,type="state")) 
+(pSE<-backTransform(model,type="det"))
+(ciPsi<-confint(psiSE))
+(ciP<-confint(pSE))
+Tabla_res<-rbind(psi=c(resultados[1],ciPsi),p=c(resultados[2],ciP))
+colnames(Tabla_res)<-c("Resultado","ICbajo","ICalto")
+Tabla_res
+plot(1:2,Tabla_res[,"Resultado"],xlim=c(0.5,2.5),ylim=0:1,col=c("blue","darkgreen"),pch=16,cex=2,cex.lab=1.5,xaxt="n",ann=F)
+axis(1, 1:2, labels=c(expression(psi),expression(italic(p))),cex.axis=1.5)
+arrows(1:2,Tabla_res[,"ICbajo"],1:2,Tabla_res[,"ICalto"],angle=90,length=0.1,code=3,col=c("blue","darkgreen"),lwd=2)
+
+(m0<-occu(~1 ~1,data.umf))
+backTransform(m0,type="state")
+backTransform(m0,type="det")
+
+(m1<-occu(~1 ~BOSQUE,data.umf))
+(m2<-occu(~1 ~HUELLA,data.umf))
+(m3<-occu(~1 ~ELEVAC,data.umf))
+(m4<-occu(~1 ~BOSQUE+ELEVAC,data.umf))
+(m5<-occu(~1 ~HUELLA+ELEVAC,data.umf))
+
+
+
+# Put the fitted models in a "fitList"
+fms <- fitList("psi(.)p(.)"         = m0,
+               "psi(B)p(.)"         = m1,
+               "psi(H)p(.)"         = m2,
+               "psi(E)p(.)"         = m3,
+               "psi(B+E)p(.)"       = m4,
+               "psi(H+E)p(.)"       = m5)
+
+# Rank them by AIC
+(ms <- modSel(fms))
+
+#Get results
+coef(ms)
+
+# Expected occupancy over range of BOSQUE
+newData2 <- data.frame(BOSQUE=seq(-1.6, 1.7, by=0.1))
+E.psi <- predict(m1, type="state", newdata=newData2, appendData=TRUE)
+head(E.psi)
+
+# Plot it again, but this time convert the x-axis back to original scale
+plot(Predicted ~ BOSQUE, E.psi, type="l", ylim=c(0,1), col="blue",
+     xlab="Porcentaje de Bosque",
+     ylab="Probabilidad de ocupacion esperada",
+     xaxt="n")
+xticks <- -2:2
+xlabs <- xticks*B.sd + B.mean
+axis(1, at=xticks, labels=round(xlabs))
+lines(lower ~ BOSQUE, E.psi, type="l", col=gray(0.5))
+lines(upper ~ BOSQUE, E.psi, type="l", col=gray(0.5))
+
+# Expected occupancy over range of ELEVACION
+newData1 <- data.frame(ELEVAC=seq(-1.1, 2.5, by=0.1))
+E.psi <- predict(m3, type="state", newdata=newData1, appendData=TRUE)
+head(E.psi)
+
+# Plot it again, but this time convert the x-axis back to original scale
+plot(Predicted ~ ELEVAC, E.psi, type="l", ylim=c(0,1), col="red",
+     xlab="Elevacion (msnm)",
+     ylab="Probabilidad de ocupacion esperada",
+     xaxt="n")
+xticks <- -2:2
+xlabs <- xticks*E.sd + E.mean
+axis(1, at=xticks, labels=round(xlabs))
+lines(lower ~ ELEVAC, E.psi, type="l", col=gray(0.5))
+lines(upper ~ ELEVAC, E.psi, type="l", col=gray(0.5))
+
+# Expected occupancy over range of HUELLA
+newData3 <- data.frame(HUELLA=seq(-1.5, 1.8, by=0.1))
+E.psi <- predict(m2, type="state", newdata=newData3, appendData=TRUE)
+head(E.psi)
+
+# Plot it again, but this time convert the x-axis back to original scale
+plot(Predicted ~ HUELLA, E.psi, type="l", ylim=c(0,1), col="green",
+     xlab="Indice de Huella Humana",
+     ylab="Probabilidad de ocupacion esperada",
+     xaxt="n")
+xticks <- -2:2
+xlabs <- xticks*H.sd + H.mean
+axis(1, at=xticks, labels=round(xlabs))
+lines(lower ~ HUELLA, E.psi, type="l", col=gray(0.5))
+lines(upper ~ HUELLA, E.psi, type="l", col=gray(0.5))

Putumayo/Venado_S3_covariables_sitio_10D.txt

@@ -0,0 +1,44 @@
+O1	O2	O3	O4	O5	O6	O7	O8	O9	O10	O11	B	H	E
+0	0	0	0	0	0	0	0	0	0	0	19.91	42	331
+0	0	0	0	0	0	0	0	0	0	0	11.98	37	233
+0	0	0	0	0	0	0	0	0	0	0	35.01	31	259
+0	0	0	0	0	0	0	0	0	0	0	14.81	37	250
+0	0	0	0	0	0	0	0	0	0	0	37.74	31	266
+0	0	0	0	0	0	0	0	1	0	0	17.08	28	176
+0	0	0	0	0	0	0	0	0	0	0	10.28	28	238
+0	0	0	0	0	0	0	0	0	0	0	28.49	25	267
+0	0	0	1	0	0	0	0	0	0	0	43.59	22	245
+0	1	1	1	0	0	0	0	1	1	1	51.52	8	310
+0	0	0	0	0	0	0	0	1	0	0	16.42	25	171
+0	0	0	1	0	0	0	0	0	0	0	29.25	11	250
+0	0	0	0	0	0	1	0	0	0	0	53.03	5	212
+0	0	0	0	0	0	1	1	1	1	1	37.93	25	233
+0	0	0	0	0	0	0	0	0	0	0	30.38	25	187
+0	1	0	0	0	0	0	0	1	1	1	57.65	14	248
+0	0	0	0	0	0	1	0	0	0	0	60.76	8	247
+0	0	0	0	0	0	0	0	0	0	0	70.67	5	193
+0	0	0	0	0	0	0	0	0	0	1	73.03	5	257
+0	0	0	0	0	0	0	1	0	0	0	68.50	5	235
+0	0	0	0	0	0	0	0	0	0	0	45.10	8	212
+1	1	1	1	1	0	1	0	1	0	1	62.56	8	243
+0	0	0	0	0	0	1	0	0	0	0	29.34	31	400
+0	0	0	0	0	0	0	0	0	0	0	46.70	17	378
+0	0	0	0	0	0	1	0	1	1	1	71.33	14	340
+0	0	0	0	0	0	0	0	0	0	0	25.48	37	320
+0	0	0	0	0	0	0	0	0	0	0	79.45	17	384
+1	0	0	0	0	0	0	0	0	0	1	79.45	17	426
+0	0	0	0	0	0	0	0	0	0	0	56.23	20	376
+0	0	0	0	0	0	0	0	0	0	0	42.65	20	334
+1	1	1	0	0	0	0	0	1	0	0	49.06	22	406
+0	0	0	0	0	0	0	0	0	0	0	48.03	34	409
+0	0	0	0	0	1	0	1	1	0	0	37.18	22	399
+0	0	0	0	0	0	0	0	0	0	0	9.91	42	411
+1	0	1	0	0	0	0	1	1	0	1	76.33	14	920
+0	0	0	0	0	0	0	0	0	0	0	78.50	25	857
+0	0	0	0	0	0	0	0	0	0	0	31.14	31	645
+0	0	0	0	0	0	0	0	0	0	0	24.63	42	696
+0	1	0	0	0	0	0	0	0	0	0	50.86	34	520
+0	0	0	0	0	0	0	0	0	0	0	12.83	37	748
+0	0	0	0	0	0	0	0	0	0	0	70.86	8	791
+0	0	0	0	0	0	0	0	0	0	0	26.14	14	789
+0	0	1	1	1	0	0	0	0	0	0	76.61	5	878

compose-dev.yaml

@@ -0,0 +1,12 @@
+services:
+  app:
+    entrypoint:
+    - sleep
+    - infinity
+    image: docker/dev-environments-default:stable-1
+    init: true
+    volumes:
+    - type: bind
+      source: /var/run/docker.sock
+      target: /var/run/docker.sock
+

compose.env.yml

@@ -19,3 +19,6 @@ services:
     #   dockerfile: julia-dockerfile
     command: sh # Avoids launching julia session that will not be used.
     tty: true # Needed to keep the container alive, waiting for requests.
+
+  tiler:
+    platform: linux/x86_64