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Merge branch 'develop' into feature/sframbat/viscoacoustic
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sframba committed Dec 12, 2024
2 parents 0d0a713 + d737e8d commit fbd0d95
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2 changes: 1 addition & 1 deletion .devcontainer/devcontainer.json
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"build": {
"dockerfile": "Dockerfile",
"args": {
"GEOS_TPL_TAG": "286-547"
"GEOS_TPL_TAG": "288-584"
}
},
"runArgs": [
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2 changes: 1 addition & 1 deletion COPYRIGHT
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Expand Up @@ -8,7 +8,7 @@ contributors. The following copyright applies to each file in the GEOS
distribution, unless otherwise stated in the file:

* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
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13 changes: 0 additions & 13 deletions RELEASE
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82 changes: 0 additions & 82 deletions RELEASE_NOTES.md
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2 changes: 1 addition & 1 deletion examples/ObjectCatalog/Base.hpp
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* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
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2 changes: 1 addition & 1 deletion examples/ObjectCatalog/Derived1.cpp
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* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
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2 changes: 1 addition & 1 deletion examples/ObjectCatalog/Derived1.hpp
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* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
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9 changes: 5 additions & 4 deletions examples/ObjectCatalog/Derived2.cpp
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* ------------------------------------------------------------------------------------------------------------
* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2018-2020 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2020 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2018-2020 Total, S.A
* Copyright (c) 2019- GEOSX Contributors
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
* All rights reserved
*
* See top level LICENSE, COPYRIGHT, CONTRIBUTORS, NOTICE, and ACKNOWLEDGEMENTS files for details.
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2 changes: 1 addition & 1 deletion examples/ObjectCatalog/Derived2.hpp
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* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
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2 changes: 1 addition & 1 deletion examples/ObjectCatalog/main.cpp
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* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
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6 changes: 3 additions & 3 deletions host-configs/LLNL/lassen-clang-10-cuda-11.cmake
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@@ -1,16 +1,16 @@
include(${CMAKE_CURRENT_LIST_DIR}/../../src/coreComponents/LvArray/host-configs/LLNL/lassen-clang-10-cuda-11.cmake)

# Fortran
set(CMAKE_Fortran_COMPILER /usr/tce/packages/xl/xl-2022.08.19-cuda-11.8.0/bin/xlf_r CACHE PATH "")
set(CMAKE_Fortran_COMPILER /usr/tce/packages/xl/xl-2023.06.28/xlf/16.1.1/bin/xlf CACHE PATH "")
set(CMAKE_Fortran_FLAGS_RELEASE "-O3 -DNDEBUG -qarch=pwr9 -qtune=pwr9" CACHE STRING "")
set(FORTRAN_MANGLE_NO_UNDERSCORE ON CACHE BOOL "")
set(OpenMP_Fortran_FLAGS "-qsmp=omp" CACHE STRING "")
set(OpenMP_Fortran_LIB_NAMES "" CACHE STRING "")

# MPI
set(MPI_HOME /usr/tce/packages/spectrum-mpi/spectrum-mpi-rolling-release-clang-10.0.1-gcc-8.3.1 CACHE PATH "")
set(MPI_Fortran_COMPILER /usr/tce/packages/spectrum-mpi/spectrum-mpi-rolling-release-xl-2022.08.19-cuda-11.8.0/bin/mpifort CACHE PATH "")
set(MPI_Fortran_COMPILER /usr/tce/packages/spectrum-mpi/spectrum-mpi-rolling-release-xl-2023.06.28-cuda-11.8.0/bin/mpifort CACHE PATH "")

include(${CMAKE_CURRENT_LIST_DIR}/lassen-base.cmake)

set(ENABLE_CUDA_NVTOOLSEXT OFF CACHE BOOL "")
set(ENABLE_CUDA_NVTOOLSEXT ON CACHE BOOL "")
4 changes: 2 additions & 2 deletions host-configs/LLNL/lassen-clang-13-cuda-11.cmake
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include(${CMAKE_CURRENT_LIST_DIR}/../../src/coreComponents/LvArray/host-configs/LLNL/lassen-clang-13-cuda-11.cmake)

# Fortran
set(CMAKE_Fortran_COMPILER /usr/tce/packages/xl/xl-2022.08.19-cuda-11.8.0/bin/xlf_r CACHE PATH "")
set(CMAKE_Fortran_COMPILER /usr/tce/packages/xl/xl-2023.06.28/xlf/16.1.1/bin/xlf CACHE PATH "")
set(CMAKE_Fortran_FLAGS_RELEASE "-O3 -DNDEBUG -qarch=pwr9 -qtune=pwr9" CACHE STRING "")
set(FORTRAN_MANGLE_NO_UNDERSCORE ON CACHE BOOL "")
set(OpenMP_Fortran_FLAGS "-qsmp=omp" CACHE STRING "")
set(OpenMP_Fortran_LIB_NAMES "" CACHE STRING "")

# MPI
set(MPI_HOME /usr/tce/packages/spectrum-mpi/spectrum-mpi-rolling-release-clang-13.0.1-gcc-8.3.1 CACHE PATH "")
set(MPI_Fortran_COMPILER /usr/tce/packages/spectrum-mpi/spectrum-mpi-rolling-release-xl-2022.08.19-cuda-11.8.0/bin/mpifort CACHE PATH "")
set(MPI_Fortran_COMPILER /usr/tce/packages/spectrum-mpi/spectrum-mpi-rolling-release-xl-2023.06.28-cuda-11.8.0/bin/mpifort CACHE PATH "")

include(${CMAKE_CURRENT_LIST_DIR}/lassen-base.cmake)

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2 changes: 2 additions & 0 deletions host-configs/LLNL/lassen-gcc-8-cuda-11.cmake
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Expand Up @@ -14,4 +14,6 @@ set(FORTRAN_MANGLE_NO_UNDERSCORE OFF CACHE BOOL "")
set(MPI_HOME /usr/tce/packages/spectrum-mpi/spectrum-mpi-rolling-release-gcc-8.3.1 CACHE PATH "")
set(MPI_Fortran_COMPILER ${MPI_HOME}/bin/mpifort CACHE PATH "")

set(ENABLE_CUDA_NVTOOLSEXT ON CACHE BOOL "")

include(${CMAKE_CURRENT_LIST_DIR}/lassen-base.cmake)
11 changes: 6 additions & 5 deletions scripts/copyrightPrepender.py
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* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
Expand All @@ -54,10 +54,11 @@
* ------------------------------------------------------------------------------------------------------------
* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2018-2020 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2020 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2018-2020 TotalEnergies
* Copyright (c) 2019- GEOSX Contributors
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
* All rights reserved
*
* See top level LICENSE, COPYRIGHT, CONTRIBUTORS, NOTICE, and ACKNOWLEDGEMENTS files for details.
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8 changes: 4 additions & 4 deletions scripts/pygeosx_configs/blueos_3_ppc64le_ib_p9/spack.yaml
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#------------------------------------------------------------------------------------------------------------
# SPDX-License-Identifier: LGPL-2.1-only
#
# Copyright (c) 2018-2020 Lawrence Livermore National Security LLC
# Copyright (c) 2018-2020 The Board of Trustees of the Leland Stanford Junior University
# Copyright (c) 2018-2020 TotalEnergies
# Copyright (c) 2019- GEOSX Contributors
# Copyright (c) 2018-2024 Lawrence Livermore National Security LLC
# Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
# Copyright (c) 2018-2024 TotalEnergies
# Copyright (c) 2019- GEOS/GEOSX Contributors
# All rights reserved
#
# See top level LICENSE, COPYRIGHT, CONTRIBUTORS, NOTICE, and ACKNOWLEDGEMENTS files for details.
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8 changes: 4 additions & 4 deletions scripts/pygeosx_configs/toss_4_x86_64_ib/spack.yaml
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#------------------------------------------------------------------------------------------------------------
# SPDX-License-Identifier: LGPL-2.1-only
#
# Copyright (c) 2018-2020 Lawrence Livermore National Security LLC
# Copyright (c) 2018-2020 The Board of Trustees of the Leland Stanford Junior University
# Copyright (c) 2018-2020 TotalEnergies
# Copyright (c) 2019- GEOSX Contributors
# Copyright (c) 2018-2024 Lawrence Livermore National Security LLC
# Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
# Copyright (c) 2018-2024 TotalEnergies
# Copyright (c) 2019- GEOS/GEOSX Contributors
# All rights reserved
#
# See top level LICENSE, COPYRIGHT, CONTRIBUTORS, NOTICE, and ACKNOWLEDGEMENTS files for details.
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8 changes: 4 additions & 4 deletions scripts/spack_configs/blueos_3_ppc64le_ib_p9/spack.yaml
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#------------------------------------------------------------------------------------------------------------
# SPDX-License-Identifier: LGPL-2.1-only
#
# Copyright (c) 2018-2020 Lawrence Livermore National Security LLC
# Copyright (c) 2018-2020 The Board of Trustees of the Leland Stanford Junior University
# Copyright (c) 2018-2020 TotalEnergies
# Copyright (c) 2019- GEOSX Contributors
# Copyright (c) 2018-2024 Lawrence Livermore National Security LLC
# Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
# Copyright (c) 2018-2024 TotalEnergies
# Copyright (c) 2019- GEOS/GEOSX Contributors
# All rights reserved
#
# See top level LICENSE, COPYRIGHT, CONTRIBUTORS, NOTICE, and ACKNOWLEDGEMENTS files for details.
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8 changes: 4 additions & 4 deletions scripts/spack_configs/toss_3_x86_64_ib/spack.yaml
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#------------------------------------------------------------------------------------------------------------
# SPDX-License-Identifier: LGPL-2.1-only
#
# Copyright (c) 2018-2020 Lawrence Livermore National Security LLC
# Copyright (c) 2018-2020 The Board of Trustees of the Leland Stanford Junior University
# Copyright (c) 2018-2020 TotalEnergies
# Copyright (c) 2019- GEOSX Contributors
# Copyright (c) 2018-2024 Lawrence Livermore National Security LLC
# Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
# Copyright (c) 2018-2024 TotalEnergies
# Copyright (c) 2019- GEOS/GEOSX Contributors
# All rights reserved
#
# See top level LICENSE, COPYRIGHT, CONTRIBUTORS, NOTICE, and ACKNOWLEDGEMENTS files for details.
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8 changes: 4 additions & 4 deletions scripts/spack_configs/toss_4_x86_64_ib/spack.yaml
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#------------------------------------------------------------------------------------------------------------
# SPDX-License-Identifier: LGPL-2.1-only
#
# Copyright (c) 2018-2020 Lawrence Livermore National Security LLC
# Copyright (c) 2018-2020 The Board of Trustees of the Leland Stanford Junior University
# Copyright (c) 2018-2020 TotalEnergies
# Copyright (c) 2019- GEOSX Contributors
# Copyright (c) 2018-2024 Lawrence Livermore National Security LLC
# Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
# Copyright (c) 2018-2024 TotalEnergies
# Copyright (c) 2019- GEOS/GEOSX Contributors
# All rights reserved
#
# See top level LICENSE, COPYRIGHT, CONTRIBUTORS, NOTICE, and ACKNOWLEDGEMENTS files for details.
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2 changes: 1 addition & 1 deletion src/coreComponents/LvArray
Submodule LvArray updated 1 files
+1 −1 host-configs/LLNL/llnl-tpls-base.cmake
2 changes: 1 addition & 1 deletion src/coreComponents/codingUtilities/CMakeLists.txt
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# SPDX-License-Identifier: LGPL-2.1-only
#
# Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
# Copyright (c) 2018-2024 Total, S.A
# Copyright (c) 2018-2024 TotalEnergies
# Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
# Copyright (c) 2023-2024 Chevron
# Copyright (c) 2019- GEOS/GEOSX Contributors
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2 changes: 1 addition & 1 deletion src/coreComponents/codingUtilities/Parsing.cpp
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* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
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2 changes: 1 addition & 1 deletion src/coreComponents/codingUtilities/Parsing.hpp
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* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
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2 changes: 1 addition & 1 deletion src/coreComponents/codingUtilities/RTTypes.cpp
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* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
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2 changes: 1 addition & 1 deletion src/coreComponents/codingUtilities/RTTypes.hpp
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* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
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2 changes: 1 addition & 1 deletion src/coreComponents/codingUtilities/SFINAE_Macros.hpp
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* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
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2 changes: 1 addition & 1 deletion src/coreComponents/codingUtilities/UnitTestUtilities.hpp
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* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
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2 changes: 1 addition & 1 deletion src/coreComponents/codingUtilities/Utilities.hpp
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* SPDX-License-Identifier: LGPL-2.1-only
*
* Copyright (c) 2016-2024 Lawrence Livermore National Security LLC
* Copyright (c) 2018-2024 Total, S.A
* Copyright (c) 2018-2024 TotalEnergies
* Copyright (c) 2018-2024 The Board of Trustees of the Leland Stanford Junior University
* Copyright (c) 2023-2024 Chevron
* Copyright (c) 2019- GEOS/GEOSX Contributors
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