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fix: Fix SeismicityRate script. #3441

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fix: Fix SeismicityRate script. #3441

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9c80275
fix: Fix SeismicityRate script.
CusiniM Nov 13, 2024
eec6a6c
Merge remote-tracking branch 'origin/develop' into cusini1/fixInduced…
CusiniM Jan 3, 2025
7be8107
add write tables option.
CusiniM Jan 3, 2025
544713a
fix syntax.
CusiniM Jan 3, 2025
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37 changes: 18 additions & 19 deletions inputFiles/inducedSeismicity/scripts/SeismicityRate_curveChecks.py
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Original file line number Diff line number Diff line change
Expand Up @@ -55,7 +55,7 @@ def curve_check_solution(**kwargs):
return np.array(analytical_rates)


def debug( xmlFilePath ):
def debug( xmlFilePath, hdf5FilePath, write_tables ):
#-------- Extract info from XML
parameters = getParametersFromXML( xmlFilePath )

Expand All @@ -70,51 +70,50 @@ def debug( xmlFilePath ):
while time < final_time:
tau = analytical_solution.compute_shear_stress(time, dt)
analytical_rate = analytical_solution.compute_seismic_rate(time, dt, tau)
time += dt
times.append(time)
analytical_rates.append(analytical_rate)
tau_plot.append(tau)
time += dt

if write_tables:
import csv

import csv

# Write times to a CSV file without headers
with open('shearStress_time.csv', 'w', newline='') as file:
# Write times to a CSV file without headers
with open('shearStress_time.csv', 'w', newline='') as file:
writer = csv.writer(file)
for time in times:
writer.writerow([time])

# Write tau_plot to a CSV file without headers
with open('shearStress_values.csv', 'w', newline='') as file:
# Write tau_plot to a CSV file without headers
with open('shearStress_values.csv', 'w', newline='') as file:
writer = csv.writer(file)
for tau in tau_plot:
writer.writerow([tau])

import h5py
file_path = '/usr/workspace/cusini1/geosx/geosx_dev/GEOS_2/build-quartz-gcc-12-release/Output/seismicityRate.hdf5'
with h5py.File(file_path, 'r') as file:
# List all groups
print("Keys: %s" % file.keys())

with h5py.File(hdf5FilePath, 'r') as file:
# Get the data
time = np.squeeze(file['seismicityRate Time'][:])
seismicityRate = np.squeeze(file['seismicityRate'][:])
print(time)
print(seismicityRate)

# Plot analytical (continuous line) and numerical (markers) aperture solution
fig, ax = plt.subplots(figsize=(16, 12), nrows=2, ncols=1)

ax[0].plot(times, tau_plot)
ax[0].plot(times, tau_plot, color='r', lw=4)
ax[0].set_xlabel('time [s]', weight="bold")
ax[0].set_ylabel('shear stress', weight="bold")

ax[1].plot(times, analytical_rates)
ax[1].plot(times, analytical_rates, label='Analytical Solution', color='r', lw=4)
ax[1].plot(time, seismicityRate, label='geos', color='k', lw=4)
ax[1].set_xlabel('time [s]', weight="bold")
ax[1].set_ylabel('seismic rate', weight="bold")
ax[1].legend( bbox_to_anchor=(0.1, 0.8), loc='center', borderaxespad=0., fontsize=12)
plt.savefig("seismicRate.png")

if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument('-f', '--xml-file', type=str, help='Path to XML file')
parser.add_argument('-f', '--xml-file', type=str, required=True, help='Path to XML file')
parser.add_argument('-h5', '--hdf5-file', type=str, required=True, help='Path to hdf5 file')
parser.add_argument('-wt', '--write-tables', action='store_true', help='Write the input tables.')
args = parser.parse_args()
debug( args.xml_file )
debug( args.xml_file, args.hdf5_file, args.write_tables )
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