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Fix deletes

Fix deletes #26

name: Run GRTresna Tests (Intel classic)
on: [push]
jobs:
build-and-test:
runs-on: ubuntu-20.04
strategy:
matrix:
mpi: ['TRUE', 'FALSE']
fail-fast: false
name: Intel (classic) MPI = ${{ matrix.mpi }}
env:
CHOMBO_HOME: ${{ github.workspace }}/Chombo/lib
OMP_NUM_THREADS: 1
GRCHOMBO_HOME: ${{ github.workspace }}/GRChombo
BUILD_ARGS: MPI=${{ matrix.mpi}}
steps:
- name: Checkout Chombo
uses: actions/checkout@v2
with:
repository: GRChombo/Chombo
path: Chombo
- name: Checkout GRChombo
uses: actions/checkout@v2
with:
repository: GRChombo/GRChombo
path: GRChombo
- name: Checkout GRTresna
uses: actions/checkout@v2
with:
path: GRTresna
- name: Install Chombo dependencies
run: |
sudo apt-get update
sudo apt-get -y --no-install-recommends install csh libgetopt-complete-perl
- name: Install Intel compilers
run: |
wget -O- https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB \
| gpg --dearmor | sudo tee /usr/share/keyrings/oneapi-archive-keyring.gpg > /dev/null
echo "deb [signed-by=/usr/share/keyrings/oneapi-archive-keyring.gpg] https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list
sudo apt-get update
sudo apt-get -y install intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic-2023.2.4 intel-oneapi-compiler-fortran-2023.2.4 intel-oneapi-mkl-2023.2.0 intel-oneapi-openmp-2023.2.4
working-directory: /tmp
- name: Install Intel MPI
if: matrix.mpi == 'TRUE'
run: |
sudo apt-get -y install intel-oneapi-mpi intel-oneapi-mpi-devel
- name: Build Chombo
run: |
source /opt/intel/oneapi/setvars.sh
MAKE_DEFS_FILE=$GRCHOMBO_HOME/InstallNotes/MakeDefsLocalExamples/intel-classic-no-hdf5-minimal.Make.defs.local
cp $MAKE_DEFS_FILE $CHOMBO_HOME/mk/Make.defs.local
make -j 4 AMRTimeDependent AMRTools BaseTools BoxTools $BUILD_ARGS
working-directory: ${{ env.CHOMBO_HOME }}
- name: Build GRTresna Tests
run: |
source /opt/intel/oneapi/setvars.sh
make all -j 4 $BUILD_ARGS
working-directory: ${{ github.workspace }}/GRTresna/Tests/PeriodicScalarFieldTest
- name: Run GRTresna Tests
run: |
source /opt/intel/oneapi/setvars.sh
make run -j 2 $BUILD_ARGS
working-directory: ${{ github.workspace }}/GRTresna/Tests/PeriodicScalarFieldTest