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Maya Brandi
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Nov 26, 2014
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INITALQCFINISHEDLIB = {'24' : 'Customer Gel QC', | ||
'62' : 'qPCR QC (Library Validation) 4.0', | ||
'64' : 'Quant-iT QC (Library Validation) 4.0', | ||
'67' : 'Qubit QC (Library Validation) 4.0', | ||
'20' : 'CaliperGX QC (DNA)', | ||
'17' : 'Bioanalyzer QC (Library Validation) 4.0'} | ||
INITALQC ={'63' : 'Quant-iT QC (DNA) 4.0', | ||
'65' : 'Quant-iT QC (RNA) 4.0', | ||
'66' : 'Qubit QC (DNA) 4.0', | ||
'68' : 'Qubit QC (RNA) 4.0', | ||
'24' : 'Customer Gel QC', | ||
'20' : 'CaliperGX QC (DNA)', | ||
'16' : 'Bioanalyzer QC (DNA) 4.0', | ||
'18' : 'Bioanalyzer QC (RNA) 4.0', | ||
'116' : 'CaliperGX QC (RNA)', | ||
'504' : 'Volume Measurement QC'} | ||
AGRINITQC = {'7' : 'Aggregate QC (DNA) 4.0', | ||
'9' : 'Aggregate QC (RNA) 4.0'} | ||
PREPREPSTART = {'74': 'Shear DNA (SS XT) 4.0', | ||
'304' : "Ligate 3' adapters (TruSeq small RNA) 1.0"} | ||
POOLING = {'42': "Library Pooling (Illumina SBS) 4.0", | ||
'43': "Library Pooling (MiSeq) 4.0", | ||
'44': "Library Pooling (TruSeq Amplicon) 4.0", | ||
'45': "Library Pooling (TruSeq Exome) 4.0", | ||
'58': "Pooling For Multiplexed Sequencing (SS XT) 4.0", | ||
'255': "Library Pooling (Finished Libraries) 4.0", | ||
'308': "Library Pooling (TruSeq Small RNA) 1.0", | ||
'404': "Pre-Pooling (Illumina SBS) 4.0", | ||
'506': "Pre-Pooling (MiSeq) 4.0", | ||
'508': "Applications Pre-Pooling"} | ||
PREPSTART = {'10' : 'Aliquot Libraries for Hybridization (SS XT)', | ||
'47' : 'mRNA Purification, Fragmentation & cDNA synthesis (TruSeq RNA) 4.0', | ||
'33' : 'Fragment DNA (TruSeq DNA) 4.0', | ||
'407' : 'Fragment DNA (ThruPlex)', | ||
'308': 'Library Pooling (TruSeq Small RNA) 1.0', | ||
'117' : 'Applications Generic Process', | ||
'405' : 'RiboZero depletion'} | ||
PREPEND = {'157': 'Applications Finish Prep', | ||
'109' : 'CA Purification', | ||
'456' : 'Purification (ThruPlex)', | ||
'111' : 'Amplify Captured Libraries to Add Index Tags (SS XT) 4.0', | ||
'406' : 'End repair, size selection, A-tailing and adapter ligation (TruSeq PCR-free DNA) 4.0', | ||
'311': 'Sample Placement (Size Selection)'} | ||
LIBVAL = {'62' : 'qPCR QC (Library Validation) 4.0', | ||
'64' : 'Quant-iT QC (Library Validation) 4.0', | ||
'67' : 'Qubit QC (Library Validation) 4.0', | ||
'20' : 'CaliperGX QC (DNA)', | ||
'17' : 'Bioanalyzer QC (Library Validation) 4.0'} | ||
LIBVALFINISHEDLIB = {'62' : 'qPCR QC (Library Validation) 4.0', | ||
'64' : 'Quant-iT QC (Library Validation) 4.0', | ||
'67' : 'Qubit QC (Library Validation) 4.0', | ||
'20' : 'CaliperGX QC (DNA)', | ||
'17' : 'Bioanalyzer QC (Library Validation) 4.0', | ||
'24' : 'Customer Gel QC'} | ||
AGRLIBVAL = {'8': 'Aggregate QC (Library Validation) 4.0'} | ||
SEQSTART = {'23':'Cluster Generation (Illumina SBS) 4.0', | ||
'26':'Denature, Dilute and Load Sample (MiSeq) 4.0'} | ||
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DILSTART = {'40' : 'Library Normalization (MiSeq) 4.0', | ||
'39' : 'Library Normalization (Illumina SBS) 4.0'} | ||
SEQUENCING = {'38' : 'Illumina Sequencing (Illumina SBS) 4.0', | ||
'46' : 'MiSeq Run (MiSeq) 4.0'} | ||
WORKSET = {'204' : 'Setup Workset/Plate'} | ||
SUMMARY = {'356' : 'Project Summary 1.3'} | ||
DEMULTIPLEX={'13' : 'Bcl Conversion & Demultiplexing (Illumina SBS) 4.0'} | ||
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FINLIB = ['Finished library', 'Amplicon'] | ||
PROJ_UDF_EXCEPTIONS = ['customer_reference','uppnex_id','reference_genome','application'] | ||
SAMP_UDF_EXCEPTIONS = ['customer_name','reads_requested_(millions)','min_reads', | ||
'm_reads','dup_rm','status_auto','status_manual','average_size_bp','incoming_qc_status'] | ||
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CALIPER={'20' : 'CaliperGX QC (DNA)','116' : 'CaliperGX QC (RNA)'} | ||