Bump treverhines-rbf

pyproject.toml

@@ -41,6 +41,9 @@ dev-dependencies = [
     "ruff>=0.6.9",
 ]
 
+[tool.uv.sources]
+treverhines-rbf = { git = "https://github.com/treverhines/RBF" }
+
 [tool.hatch.metadata]
 allow-direct-references = true
 
@@ -77,4 +80,4 @@ check-config = "scripts.tools.check_config:main"
 cut-slice = "scripts.tools.cut_slice:main"
 sample-cells = "scripts.tools.sample_cells:main"
 reposition-trees = "scripts.tools.reposition_trees:main"
-optimize-network = "scripts.optimization.optimize_network:main_cli"
+optimize-network = "scripts.optimization.optimize_network:main_cli"

src/miv_simulator/network.py

@@ -2,7 +2,7 @@
 Network initialization routines.
 """
 
-from typing import Dict, Union
+from typing import Dict, Union, Optional
 import gc
 import os
 import pprint
@@ -21,7 +21,6 @@
 from miv_simulator.utils import neuron as neuron_utils
 from miv_simulator.utils import profile_memory, simtime, zip_longest
 from miv_simulator.utils.neuron import h
-from miv_simulator.opto.run import *
 
 if hasattr(h, "nrnmpi_init"):
     h.nrnmpi_init()
@@ -1684,6 +1683,9 @@ def init(env: Env, subworld_size: Optional[int] = None) -> None:
         }
         rho_params = env.opsin_config["rho parameters"]
         protocol_params = env.opsin_config["protocol parameters"]
+
+        from miv_simulator.opto.run import OptoStim
+
         env.opto_stim = OptoStim(
             env.pc,
             opsin_pop_dict,