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Merge pull request #355 from douglasjacobsen/ramble_root_reference
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Convert ramble root to existing variable
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rfbgo authored Dec 19, 2023
2 parents d99fe61 + 0543fee commit 77a64ef
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4 changes: 2 additions & 2 deletions lib/ramble/docs/tutorials/1_hello_world.rst
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Expand Up @@ -112,7 +112,7 @@ This will create a named workspace for you in:

.. code-block:: console
$ $ramble_root/var/ramble/workspaces/hello_world
$ $RAMBLE_ROOT/var/ramble/workspaces/hello_world
Now you can activate the workspace and view its default configuration.

Expand Down Expand Up @@ -212,7 +212,7 @@ For each setup run, a set of logs will be created at:

.. code-block:: console
$ $ramble_root/var/ramble/workspaces/$workspace_root/logs
$ $RAMBLE_ROOT/var/ramble/workspaces/$workspace_root/logs
Each run will have its own primary log, along with a folder containing a log for each
experiment that is being configured.
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Expand Up @@ -124,15 +124,15 @@ For each setup run, a set of logs will be created at:

.. code-block:: console
$ $ramble_root/var/ramble/workspaces/$workspace_root/logs
$ $RAMBLE_ROOT/var/ramble/workspaces/$workspace_root/logs
Each run will have its own primary log, along with a folder containing a log
for each experiment that is being configured. While setup is running, you can
monitor the process by looking at the contents of:

.. code-block:: console
$ $ramble_root/var/ramble/workspaces/basic_gromacs/logs/setup.latest/gromacs.water_gmx50.pme_single_rank.out
$ $RAMBLE_ROOT/var/ramble/workspaces/basic_gromacs/logs/setup.latest/gromacs.water_gmx50.pme_single_rank.out
Executing Experiments
---------------------
Expand Down Expand Up @@ -174,7 +174,7 @@ After analyzing the workspace, you can exmine the structure of the workspace at:

.. code-block:: console
$ $ramble_root/var/ramble/workspaces/basic_gromacs
$ $RAMBLE_ROOT/var/ramble/workspaces/basic_gromacs
Within this directory, you should see the following directories:

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4 changes: 2 additions & 2 deletions lib/ramble/docs/tutorials/shared/gromacs_vector_workspace.rst
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Expand Up @@ -30,7 +30,7 @@ This will create a workspace for you in:

.. code-block:: console
$ $ramble_root/var/ramble/workspaces/basic_gromacs
$ $RAMBLE_ROOT/var/ramble/workspaces/basic_gromacs
Now you can activate the workspace and view its default configuration.

Expand Down Expand Up @@ -59,7 +59,7 @@ You can edit these files directly or with the command ``ramble workspace edit``.

To begin, you should edit the ``ramble.yaml`` file to set up the configuration
for your experiments. For this tutorial, replace the default yaml text with the
contents of ``$ramble_root/examples/vector_matrix_gromacs_config.yaml``:
contents of ``$RAMBLE_ROOT/examples/vector_matrix_gromacs_config.yaml``:


.. literalinclude:: ../../../../examples/vector_matrix_gromacs_config.yaml
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4 changes: 2 additions & 2 deletions lib/ramble/docs/tutorials/shared/gromacs_workspace.rst
Original file line number Diff line number Diff line change
Expand Up @@ -30,7 +30,7 @@ This will create a workspace for you in:

.. code-block:: console
$ $ramble_root/var/ramble/workspaces/basic_gromacs
$ $RAMBLE_ROOT/var/ramble/workspaces/basic_gromacs
Now you can activate the workspace and view its default configuration.

Expand Down Expand Up @@ -59,7 +59,7 @@ You can edit these files directly or with the command ``ramble workspace edit``.

To begin, you should edit the ``ramble.yaml`` file to set up the configuration
for your experiments. For this tutorial, replace the default yaml text with the
contents of ``$ramble_root/examples/basic_gromacs_config.yaml``:
contents of ``$RAMBLE_ROOT/examples/basic_gromacs_config.yaml``:


.. literalinclude:: ../../../../examples/basic_gromacs_config.yaml
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