Skip to content
@GreshamLab

The Gresham Lab at the NYU Center for Genomics and System Biology

Github Organization for all Gresham Lab Code

Pinned Loading

  1. RNAseq RNAseq Public

    The Gresham Lab RNAseq pipeline

    Python 2

  2. bartools bartools Public

    tools for analyzing barseq data

    R 1

  3. labtools labtools Public

    useful R functions for data analysis

    R 1 1

  4. RATE_seq RATE_seq Public

    Forked from far279/RATE_seq

    R 1

  5. trumiseq trumiseq Public

    Analysis scripts for TrUMIseq adaptors

    Perl

  6. flowtools flowtools Public

    tools for analyzing flow cytometry data in the Gresham Lab

    R 1

Repositories

Showing 10 of 30 repositories
  • sc_self_supervised Public

    Self Supervised Tools for Single Cell Data

    GreshamLab/sc_self_supervised’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 28, 2024
  • SingleCell_cerevisiae Public

    Single cell RNA-sequencing on S. cerevisiae

    GreshamLab/SingleCell_cerevisiae’s past year of commit activity
    R 1 MIT 0 0 0 Updated Nov 27, 2024
  • CIVR_HRP_Day0 Public

    Code for Forst et al., 2022

    GreshamLab/CIVR_HRP_Day0’s past year of commit activity
    R 0 0 1 0 Updated Aug 13, 2024
  • supirfactor-dynamical Public

    Build dynamical deep models for transcriptional biophysics

    GreshamLab/supirfactor-dynamical’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Aug 2, 2024
  • adaptive_gene_expression Public Forked from pspealman/adaptive_gene_expression

    A collection of code used in the analysis of "Multilevel gene expression changes in lineages containing adaptive copy number variants"

    GreshamLab/adaptive_gene_expression’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Jun 26, 2024
  • jtb_2023_code Public
    GreshamLab/jtb_2023_code’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Jun 17, 2024
  • polyadenylation_cerevisiae Public

    Polyadenylation project on S. cerevisiae

    GreshamLab/polyadenylation_cerevisiae’s past year of commit activity
    Shell 1 MIT 0 0 0 Updated Mar 27, 2024
  • vivaldi Public

    An R package for studying viral genetic diversity using vcf files

    GreshamLab/vivaldi’s past year of commit activity
    R 3 1 0 0 Updated Feb 15, 2024
  • ferret-host-obesity Public

    R analyses associated with "Host obesity impacts genetic variation in influenza A viral populations"

    GreshamLab/ferret-host-obesity’s past year of commit activity
    R 0 0 0 0 Updated Jul 12, 2023
  • cnvflow Public

    workflow using CytoexploreR to analyze flow data from Cytek for CNV detection

    GreshamLab/cnvflow’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Nov 30, 2022
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Most used topics

Loading…