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requirements
James Kent edited this page Jun 10, 2018
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This is the requirements/summary of the functionality that nibetaseries should have:
- Drop-in functionality with fmriprep, outputs of fmriprep should work (without modification) with NiBetaSeries. Generally, this should work with any bids derivatives app.
- Select which outputs to use from fmriprep (as long as they are in a template space)
- The inputs to NiBetaSeries need to be in a template space.
- output will be a 2D roi-roi fisher's r->z correlation matrix (an adjacency matrix)
- group level analysis will generate one row per scan with BIDs keys as columns and values as the entries.
- preprocessing will only come from the confounds file (additional preprocessing will either have to be dropped into the fmriprep directory or a directory with a similar structure).
- the events.tsv will come from the BIDS directory (no current plans of events.tsv editing)