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Replace quartile/quarter -> quantile #360

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Jan 17, 2025
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Some QC terms that were defined as "quartiles" or "quarters" have now been replaced by more general "quantile" terms.

Fixes mzQC#259.

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All good, except the name change?

@@ -22998,8 +22998,8 @@ relationship: has_units UO:0000010 ! second

[Term]
id: MS:4000052
name: XIC-Height quartile ratios
def: "The log ratio of successive XIC height quartiles. The metric's value triplet represents the log ratios of XIC-height-Q2 to XIC-height-Q1, XIC-height-Q3 to XIC-height-Q2, XIC-height max to XIC-height-Q3." [PSI:MS]
name: obsolete XIC-Height quartile ratios
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Maybe not change the name by adding obsolete? The other obsolete term in the .obo didn't go through a name change either as far as I can find.

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Leaving the names as-is is another layer of backwards compatibility, but it's not guaranteed the way the id is guaranteed to never change.

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I got these instructions from the Protege website for obsoleting terms, but happy to modify it according to conventions adopted by the PSI-MS CV.

@mobiusklein mobiusklein merged commit 3101efc into master Jan 17, 2025
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@bittremieux bittremieux deleted the bittremieux-patch-4 branch January 17, 2025 16:21
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[CV discussion] quantiles instead of quartiles
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