Updated SLURM job id

Hjorthmedh · Feb 2, 2024 · 59bcf19 · 59bcf19
1 parent 3f45508
commit 59bcf19
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Showing 6 changed files with 18 additions and 9 deletions.
diff --git a/examples/parallel/KTH_PDC/input_tuning/Dardel_run_input_tuning_background_dspn.job b/examples/parallel/KTH_PDC/input_tuning/Dardel_run_input_tuning_background_dspn.job
@@ -28,7 +28,7 @@ export N_WORKERS=$SLURM_NTASKS
 export IPNWORKERS=50
 
 # Clear old ipyparallel
-export IPYTHONDIR="/cfs/klemming/scratch/${USER:0:1}/$USER/.ipython"
+export IPYTHONDIR="/cfs/klemming/scratch/${USER:0:1}/${USER}/.ipython-${SLURM_JOB_ID}"
 rm -r $IPYTHONDIR
 export IPYTHON_PROFILE=default
 
@@ -128,4 +128,5 @@ export FI_CXI_DEFAULT_VNI=$(od -vAn -N4 -tu < /dev/urandom)
 
 srun -n $N_WORKERS $SNUDDA_DIR/examples/parallel/KTH_PDC/input_tuning/x86_64/special -mpi -python $SNUDDA_DIR/snudda/input/input_tuning.py simulate $NETWORK_DIR --seed_list $SEED_LIST
 
-
+# Cleanup IPYTHONDIR
+rm -r $IPYTHONDIR
diff --git a/examples/parallel/KTH_PDC/input_tuning/Dardel_run_input_tuning_background_fs.job b/examples/parallel/KTH_PDC/input_tuning/Dardel_run_input_tuning_background_fs.job
@@ -28,7 +28,7 @@ export N_WORKERS=$SLURM_NTASKS
 export IPNWORKERS=50
 
 # Clear old ipyparallel
-export IPYTHONDIR="/cfs/klemming/scratch/${USER:0:1}/$USER/.ipython"
+export IPYTHONDIR="/cfs/klemming/scratch/${USER:0:1}/$USER/.ipython-${SLURM_JOB_ID}"
 rm -r $IPYTHONDIR
 export IPYTHON_PROFILE=default
 
@@ -128,4 +128,5 @@ export FI_CXI_DEFAULT_VNI=$(od -vAn -N4 -tu < /dev/urandom)
 
 srun -n $N_WORKERS $SNUDDA_DIR/examples/parallel/KTH_PDC/input_tuning/x86_64/special -mpi -python $SNUDDA_DIR/snudda/input/input_tuning.py simulate $NETWORK_DIR --seed_list $SEED_LIST
 
-
+# Cleanup IPYTHONDIR
+rm -r $IPYTHONDIR
diff --git a/examples/parallel/KTH_PDC/input_tuning/Dardel_run_input_tuning_background_ispn.job b/examples/parallel/KTH_PDC/input_tuning/Dardel_run_input_tuning_background_ispn.job
@@ -28,7 +28,7 @@ export N_WORKERS=$SLURM_NTASKS
 export IPNWORKERS=50
 
 # Clear old ipyparallel
-export IPYTHONDIR="/cfs/klemming/scratch/${USER:0:1}/$USER/.ipython"
+export IPYTHONDIR="/cfs/klemming/scratch/${USER:0:1}/$USER/.ipython-${SLURM_JOB_ID}"
 rm -r $IPYTHONDIR
 export IPYTHON_PROFILE=default
 
@@ -129,3 +129,5 @@ export FI_CXI_DEFAULT_VNI=$(od -vAn -N4 -tu < /dev/urandom)
 srun -n $N_WORKERS $SNUDDA_DIR/examples/parallel/KTH_PDC/input_tuning/x86_64/special -mpi -python $SNUDDA_DIR/snudda/input/input_tuning.py simulate $NETWORK_DIR --seed_list $SEED_LIST
 
 
+# Cleanup IPYTHONDIR
+rm -r $IPYTHONDIR
diff --git a/examples/parallel/KTH_PDC/input_tuning/Dardel_run_input_tuning_cortical_signal_dspn.job b/examples/parallel/KTH_PDC/input_tuning/Dardel_run_input_tuning_cortical_signal_dspn.job
@@ -30,7 +30,7 @@ export N_WORKERS=$SLURM_NTASKS
 export IPNWORKERS=100
 
 # Clear old ipyparallel
-export IPYTHONDIR="/cfs/klemming/scratch/${USER:0:1}/$USER/.ipython"
+export IPYTHONDIR="/cfs/klemming/scratch/${USER:0:1}/$USER/.ipython-${SLURM_JOB_ID}"
 rm -r $IPYTHONDIR
 export IPYTHON_PROFILE=default
 
@@ -130,4 +130,6 @@ export FI_CXI_DEFAULT_VNI=$(od -vAn -N4 -tu < /dev/urandom)
 
 srun -n $N_WORKERS $SNUDDA_DIR/examples/parallel/KTH_PDC/input_tuning/x86_64/special -mpi -python $SNUDDA_DIR/snudda/input/input_tuning.py simulate $NETWORK_DIR --seed_list $SEED_LIST
 
+# Cleanup IPYTHONDIR
+rm -r $IPYTHONDIR
 
diff --git a/examples/parallel/KTH_PDC/input_tuning/Dardel_run_input_tuning_cortical_signal_fs.job b/examples/parallel/KTH_PDC/input_tuning/Dardel_run_input_tuning_cortical_signal_fs.job
@@ -30,7 +30,7 @@ export N_WORKERS=$SLURM_NTASKS
 export IPNWORKERS=100
 
 # Clear old ipyparallel
-export IPYTHONDIR="/cfs/klemming/scratch/${USER:0:1}/$USER/.ipython"
+export IPYTHONDIR="/cfs/klemming/scratch/${USER:0:1}/$USER/.ipython-${SLURM_JOB_ID}"
 rm -r $IPYTHONDIR
 export IPYTHON_PROFILE=default
 
@@ -130,4 +130,5 @@ export FI_CXI_DEFAULT_VNI=$(od -vAn -N4 -tu < /dev/urandom)
 
 srun -n $N_WORKERS $SNUDDA_DIR/examples/parallel/KTH_PDC/input_tuning/x86_64/special -mpi -python $SNUDDA_DIR/snudda/input/input_tuning.py simulate $NETWORK_DIR --seed_list $SEED_LIST
 
-
+# Cleanup IPYTHONDIR
+rm -r $IPYTHONDIR
diff --git a/examples/parallel/KTH_PDC/input_tuning/Dardel_run_input_tuning_cortical_signal_ispn.job b/examples/parallel/KTH_PDC/input_tuning/Dardel_run_input_tuning_cortical_signal_ispn.job
@@ -30,7 +30,7 @@ export N_WORKERS=$SLURM_NTASKS
 export IPNWORKERS=100
 
 # Clear old ipyparallel
-export IPYTHONDIR="/cfs/klemming/scratch/${USER:0:1}/$USER/.ipython"
+export IPYTHONDIR="/cfs/klemming/scratch/${USER:0:1}/$USER/.ipython-${SLURM_JOB_ID}"
 rm -r $IPYTHONDIR
 export IPYTHON_PROFILE=default
 
@@ -131,3 +131,5 @@ export FI_CXI_DEFAULT_VNI=$(od -vAn -N4 -tu < /dev/urandom)
 srun -n $N_WORKERS $SNUDDA_DIR/examples/parallel/KTH_PDC/input_tuning/x86_64/special -mpi -python $SNUDDA_DIR/snudda/input/input_tuning.py simulate $NETWORK_DIR --seed_list $SEED_LIST
 
 
+# Cleanup IPYTHONDIR
+rm -r $IPYTHONDIR