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Hjorthmedh committed Sep 18, 2024
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{
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{
"network_file": "networks/neuromodulation_bath_current/network-synapses.hdf5",
"output_file": "networks/neuromodulation_bath_current/simulation/output_neuromodulation_ON.hdf5",
"log_file": "networks/neuromodulation_bath_current/log/network-simulation-ON.txt",
"output_file": "networks/neuromodulation_bath_current/simulation/output_neuromodulation_OFF.hdf5",
"log_file": "networks/neuromodulation_bath_current/log/network-simulation-OFF.txt",
"time": 1.5,
"record_all_soma": true,
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230 changes: 207 additions & 23 deletions examples/notebooks/neuromodulation/neuromodulation_bath_current.ipynb

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236 changes: 179 additions & 57 deletions examples/notebooks/neuromodulation/neuromodulation_on_off_bath.ipynb

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"source": [
"# DSPN neuromodulation\n",
"\n",
"This jupyter notebook analyses ```Dardel_simulate_dspn_DA_bath.job```."
"This jupyter notebook analyses ```Dardel_simulate_dspn_DA_bath.job```.\n",
"\n",
"\n",
"Here we use the data from Planert: Planert H, Berger TK, Silberberg G. Membrane properties of striatal direct and indirect pathway neurons in mouse and rat slices and their modulation by dopamine. PLoS One. 2013;8(3):e57054. doi:10.1371/journal.pone.0057054\n",
"\n",
"Bath application of 60 micromolar DA. "
]
},
{
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