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Jose Miguel de la Rosa Trevin edited this page Jan 7, 2016 · 30 revisions
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Scipion is an image processing framework for obtaining 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents a unified interface for both biologists and developers. Scipion allows you to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on.

Getting Started

  • See this ~5 minutes Introductory Video that shows an overview of Scipion.

  • Follow this step-by-step guide about How to Install Scipion.

  • Complete the Mix-and-Match Tutorial illustrating how to use several packages.

  • Take a look at the list of current integrated Packages and Protocols (more than 100).

  • Everyone is welcome to contribute:

    • Open a New Issue to report a bug or suggest a new feature (require GitHub account)

    • Extend Scipion with new protocols or packages (require basic Python programming skills).

    • Contribute to the documentation (require GitHub account, contact us to add you to the project)

More Documentation

  • Extra documentation is divided into two main categories: Users and Developers.

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