feat: ONT sample preprocessing #2825
alethomasmain.yml
on: pull_request
Linting
57s
Cancel-previous-jobs
5s
Formatting
1m 41s
Matrix: Benchmarks-Tests
Matrix: Technology-Tests
Annotations
20 errors and 2 warnings
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Technology-Tests (all, all, shotgun)
The job was canceled because "all_ion_amplicon" failed.
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Technology-Tests (all, ion, shotgun)
The job was canceled because "all_ion_amplicon" failed.
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Technology-Tests (all, ont, amplicon)
The job was canceled because "all_ion_amplicon" failed.
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Technology-Tests (all, all, amplicon)
The job was canceled because "all_ion_amplicon" failed.
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Technology-Tests (all, all, amplicon)
The operation was canceled.
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Technology-Tests (all -np, ont, shotgun)
The job was canceled because "all_ion_amplicon" failed.
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Technology-Tests (all -np, all, amplicon)
The job was canceled because "all_ion_amplicon" failed.
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Benchmarks-Tests (compare_assemblers)
The job was canceled because "benchmark_mixtures" failed.
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Benchmarks-Tests (benchmark_strain_calling)
The job was canceled because "benchmark_mixtures" failed.
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Technology-Tests (all -np, illumina, shotgun)
The job was canceled because "all_ion_amplicon" failed.
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Technology-Tests (all -np, ont, amplicon)
The job was canceled because "all_ion_amplicon" failed.
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Benchmarks-Tests (benchmark_assembly)
The job was canceled because "benchmark_mixtures" failed.
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Technology-Tests (all, illumina, amplicon)
The job was canceled because "all_ion_amplicon" failed.
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Benchmarks-Tests (benchmark_reads)
The job was canceled because "benchmark_mixtures" failed.
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Technology-Tests (all -np, all, shotgun)
The job was canceled because "all_ion_amplicon" failed.
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Technology-Tests (all -np, ion, amplicon)
The job was canceled because "all_ion_amplicon" failed.
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Technology-Tests (all -np, illumina, amplicon)
The job was canceled because "all_ion_amplicon" failed.
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Technology-Tests (all -np, ion, shotgun)
The job was canceled because "all_ion_amplicon" failed.
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Technology-Tests (all, illumina, shotgun)
The job was canceled because "all_ion_amplicon" failed.
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Technology-Tests (all, ont, shotgun)
The job was canceled because "all_ion_amplicon" failed.
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Cancel-previous-jobs
The following actions uses node12 which is deprecated and will be forced to run on node16: khan/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Cancel-previous-jobs
The following actions use a deprecated Node.js version and will be forced to run on node20: khan/[email protected]. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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