more meaningful info

IKIM-Essen · Oct 26, 2023 · 24c22e1 · 24c22e1
1 parent 6bd8434
commit 24c22e1
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflow/scripts/generate-overview-table.py b/workflow/scripts/generate-overview-table.py
@@ -133,7 +133,7 @@ def register_contig_lengths(assemblies, name):
         elif "consensus" == used:
             data.loc[sample, "Best Quality"] = "Consensus"
         elif "not-accepted" == used:
-            data.loc[sample, "Best Quality"] = "-"
+            data.loc[sample, "Best Quality"] = "not accepted by QA"
 
     # add pangolin results
     for sample, file in iter_with_samples(snakemake.input.pangolin):