Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

update dockerfile #180

Merged
merged 1 commit into from
Aug 20, 2024
Merged

update dockerfile #180

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
38 changes: 30 additions & 8 deletions Dockerfile
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,14 +1,36 @@
FROM quay.io/jupyter/minimal-notebook
# Stage 1: Build Stage
FROM quay.io/jupyter/minimal-notebook as builder

USER root

RUN apt update
RUN apt install -y graphviz
RUN apt install -y wget
RUN apt-get update

# Set up GDAL so users on ARM64 architectures can build the Fiona wheels
ENV CPLUS_INCLUDE_PATH=/usr/include/gdal
ENV C_INCLUDE_PATH=/usr/include/gdal
RUN apt-get install -y \
build-essential \
gdal-bin \
libgdal-dev \
&& apt-get clean \
&& rm -rf /var/lib/apt/lists/*

# Install naturf
RUN pip install --upgrade pip
RUN pip install naturf

# Stage 2: Final Stage
FROM quay.io/jupyter/minimal-notebook

USER root

RUN python -m pip install --upgrade pip
RUN python -m pip install naturf
# Install graphviz
RUN apt-get update
RUN apt-get install -y graphviz

RUN wget https://raw.githubusercontent.com/IMMM-SFA/naturf/main/notebooks/quickstarter.ipynb
# Copy python packages installed/built from the builder stage
COPY --from=builder /opt/conda/lib/python3.11/site-packages /opt/conda/lib/python3.11/site-packages

RUN rm -rf work
# To test this container locally, run:
# docker build -t naturf .
# docker run --rm -p 8888:8888 naturf