Skip to content
@Illumina

Illumina

Illumina Open Source Software

Popular repositories Loading

  1. hap.py hap.py Public

    Haplotype VCF comparison tools

    C++ 420 123

  2. manta manta Public archive

    Structural variant and indel caller for mapped sequencing data

    C++ 413 154

  3. SpliceAI SpliceAI Public

    A deep learning-based tool to identify splice variants

    Python 409 161

  4. strelka strelka Public

    Strelka2 germline and somatic small variant caller

    C++ 358 103

  5. ExpansionHunter ExpansionHunter Public

    A tool for estimating repeat sizes

    C++ 183 51

  6. Nirvana Nirvana Public

    The nimble & robust variant annotator

    C# 171 44

Repositories

Showing 10 of 55 repositories

Most used topics

Loading…