change default behavior to include SDs for all variables (#12) #30
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| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| on: | |
| push: | |
| branches: [main, dev] | |
| pull_request: | |
| branches: [main, dev] | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| use-public-rspm: true | |
| - name: Install dependencies Ubuntu | |
| if: runner.os == 'Linux' | |
| run: | | |
| install.packages('remotes') | |
| remotes::install_deps(dependencies = TRUE) | |
| remotes::install_cran("knitr") | |
| remotes::install_cran("rmarkdown") | |
| remotes::install_cran("rcmdcheck") | |
| install.packages("Matrix", type = "source") | |
| install.packages("TMB", type = "source") | |
| shell: Rscript {0} | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::rcmdcheck | |
| needs: check | |
| - uses: r-lib/actions/check-r-package@v2 |