Skip to content

Releases: JianYang-Lab/gsMap

v1.70

25 Sep 14:08
Compare
Choose a tag to compare

This update includes several enhancements and fixes:

  1. Quick Mode: Introduced a new quick mode utilizing precomputation for faster performance.
  2. Report and Diagnosis Module: Added a module that generates a final report, allowing users to interactively view and check results in their browser.
  3. Performance Improvements: Optimized memory usage and made various performance enhancements for a smoother experience.
  4. Bug Fixes: Addressed known issues to enhance overall stability.

v1.62

30 Mar 03:29
Compare
Choose a tag to compare

Rename to gsMap
Fix bugs

v1.54: - add the GPS docs

27 Feb 12:50
Compare
Choose a tag to compare

1.53

27 Feb 11:42
Compare
Choose a tag to compare
bug fix

1.52

27 Feb 11:41
Compare
Choose a tag to compare
publish to pypi

v1.41

27 Jan 16:50
Compare
Choose a tag to compare

Notice:

  • This version re-design the Spatial LDSC part. Now each spot has it's own weight.

Improvement:

  • optimize the run-all mode args.

v1.4a

23 Jan 08:40
Compare
Choose a tag to compare
  • add a function, which could use enhancer annotation.
  • avoid overflow of float16

v1.31

21 Jan 07:17
2912532
Compare
Choose a tag to compare
  • add run_visualize subcommand to visualize results.
  • correct some typos.

v1.3

15 Jan 13:08
Compare
Choose a tag to compare
  • optimize the latent to gene mem usage
  • add --no_expression_fraction option

v1.2

09 Jan 09:15
Compare
Choose a tag to compare

Improve:

  1. Reduce the Spatial LDSC Step RAM Usage
  2. Speed up the Latent to Gene Step
  3. Use Sparse Matrix For generate LD score
  4. Some Bug fixed