Skip static functions when generating the bindings (trixi-framework#101)

* skip static functions when generating the bindings

* put skip_static_functions at default location

dev/Manifest.toml

@@ -1,10 +1,12 @@
 # This file is machine-generated - editing it directly is not advised
 
-julia_version = "1.7.3"
+julia_version = "1.9.3"
 manifest_format = "2.0"
+project_hash = "b318b16848fa4a5ae80166fcd22b833bc2ad0770"
 
 [[deps.ArgTools]]
 uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"
+version = "1.1.1"
 
 [[deps.Artifacts]]
 uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
@@ -19,19 +21,20 @@ version = "0.4.2"
 
 [[deps.Clang]]
 deps = ["CEnum", "Clang_jll", "Downloads", "Pkg", "TOML"]
-git-tree-sha1 = "32908e9e1700e17f3676a4a097f176629b6bcdaf"
+git-tree-sha1 = "17e51c980e1797210f30155d18ea5a2f02b80833"
 uuid = "40e3b903-d033-50b4-a0cc-940c62c95e31"
-version = "0.16.5"
+version = "0.17.7"
 
 [[deps.Clang_jll]]
-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll", "libLLVM_jll"]
-git-tree-sha1 = "8cf7e67e264dedc5d321ec87e78525e958aea057"
+deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "TOML", "Zlib_jll", "libLLVM_jll"]
+git-tree-sha1 = "124bb00d4ceace456054f17c7cb01e5c8195c609"
 uuid = "0ee61d77-7f21-5576-8119-9fcc46b10100"
-version = "12.0.1+3"
+version = "14.0.6+4"
 
 [[deps.CompilerSupportLibraries_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae"
+version = "1.0.5+0"
 
 [[deps.Dates]]
 deps = ["Printf"]
@@ -50,6 +53,7 @@ version = "0.9.3"
 [[deps.Downloads]]
 deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"]
 uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6"
+version = "1.6.0"
 
 [[deps.FileWatching]]
 uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"
@@ -59,10 +63,10 @@ deps = ["Markdown"]
 uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
 
 [[deps.JLLWrappers]]
-deps = ["Preferences"]
-git-tree-sha1 = "abc9885a7ca2052a736a600f7fa66209f96506e1"
+deps = ["Artifacts", "Preferences"]
+git-tree-sha1 = "7e5d6779a1e09a36db2a7b6cff50942a0a7d0fca"
 uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210"
-version = "1.4.1"
+version = "1.5.0"
 
 [[deps.LazyArtifacts]]
 deps = ["Artifacts", "Pkg"]
@@ -71,10 +75,12 @@ uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3"
 [[deps.LibCURL]]
 deps = ["LibCURL_jll", "MozillaCACerts_jll"]
 uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21"
+version = "0.6.3"
 
 [[deps.LibCURL_jll]]
 deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"]
 uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0"
+version = "7.84.0+0"
 
 [[deps.LibGit2]]
 deps = ["Base64", "NetworkOptions", "Printf", "SHA"]
@@ -83,6 +89,7 @@ uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"
 [[deps.LibSSH2_jll]]
 deps = ["Artifacts", "Libdl", "MbedTLS_jll"]
 uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8"
+version = "1.10.2+0"
 
 [[deps.Libdl]]
 uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"
@@ -91,28 +98,36 @@ uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"
 uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"
 
 [[deps.MPI]]
-deps = ["Distributed", "DocStringExtensions", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "Requires", "Serialization", "Sockets"]
-git-tree-sha1 = "923991e1023c2f883ab6fc3e7d81580dc833eee0"
+deps = ["Distributed", "DocStringExtensions", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "PkgVersion", "PrecompileTools", "Requires", "Serialization", "Sockets"]
+git-tree-sha1 = "9dc0c2c256d8b53324770738e54083622f2ca187"
 uuid = "da04e1cc-30fd-572f-bb4f-1f8673147195"
-version = "0.20.5"
+version = "0.20.18"
+
+    [deps.MPI.extensions]
+    AMDGPUExt = "AMDGPU"
+    CUDAExt = "CUDA"
+
+    [deps.MPI.weakdeps]
+    AMDGPU = "21141c5a-9bdb-4563-92ae-f87d6854732e"
+    CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba"
 
 [[deps.MPICH_jll]]
-deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "Pkg", "TOML"]
-git-tree-sha1 = "6d4fa43afab4611d090b11617ecea1a144b21d35"
+deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
+git-tree-sha1 = "8a5b4d2220377d1ece13f49438d71ad20cf1ba83"
 uuid = "7cb0a576-ebde-5e09-9194-50597f1243b4"
-version = "4.0.2+5"
+version = "4.1.2+0"
 
 [[deps.MPIPreferences]]
 deps = ["Libdl", "Preferences"]
-git-tree-sha1 = "71f937129731a29eabe6969db2c90368a4408933"
+git-tree-sha1 = "8f6af051b9e8ec597fa09d8885ed79fd582f33c9"
 uuid = "3da0fdf6-3ccc-4f1b-acd9-58baa6c99267"
-version = "0.1.7"
+version = "0.1.10"
 
 [[deps.MPItrampoline_jll]]
-deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "Pkg", "TOML"]
-git-tree-sha1 = "b3f9e42685b4ad614eca0b44bd863cd41b1c86ea"
+deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
+git-tree-sha1 = "6979eccb6a9edbbb62681e158443e79ecc0d056a"
 uuid = "f1f71cc9-e9ae-5b93-9b94-4fe0e1ad3748"
-version = "5.0.2+1"
+version = "5.3.1+0"
 
 [[deps.Markdown]]
 deps = ["Base64"]
@@ -121,40 +136,56 @@ uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
 [[deps.MbedTLS_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1"
+version = "2.28.2+0"
 
 [[deps.MicrosoftMPI_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
-git-tree-sha1 = "a16aa086d335ed7e0170c5265247db29172af2f9"
+git-tree-sha1 = "b01beb91d20b0d1312a9471a36017b5b339d26de"
 uuid = "9237b28f-5490-5468-be7b-bb81f5f5e6cf"
-version = "10.1.3+2"
+version = "10.1.4+1"
 
 [[deps.MozillaCACerts_jll]]
 uuid = "14a3606d-f60d-562e-9121-12d972cd8159"
+version = "2022.10.11"
 
 [[deps.NetworkOptions]]
 uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
+version = "1.2.0"
 
 [[deps.OpenMPI_jll]]
-deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "Pkg", "TOML"]
-git-tree-sha1 = "346d6b357a480300ed7854dbc70e746ac52e10fd"
+deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
+git-tree-sha1 = "e25c1778a98e34219a00455d6e4384e017ea9762"
 uuid = "fe0851c0-eecd-5654-98d4-656369965a5c"
-version = "4.1.3+3"
+version = "4.1.6+0"
 
 [[deps.P4est_jll]]
 deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "MPICH_jll", "MPIPreferences", "MPItrampoline_jll", "MicrosoftMPI_jll", "OpenMPI_jll", "Pkg", "TOML", "Zlib_jll"]
-git-tree-sha1 = "d4b48fd3ca75a398916c58c1e4628bf0ce11a7b6"
+git-tree-sha1 = "70c2d9a33b8810198314a5722ee3e9520110b28d"
 uuid = "6b5a15aa-cf52-5330-8376-5e5d90283449"
-version = "2.8.1+0"
+version = "2.8.1+2"
 
 [[deps.Pkg]]
-deps = ["Artifacts", "Dates", "Downloads", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"]
+deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"]
 uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
+version = "1.9.2"
+
+[[deps.PkgVersion]]
+deps = ["Pkg"]
+git-tree-sha1 = "f9501cc0430a26bc3d156ae1b5b0c1b47af4d6da"
+uuid = "eebad327-c553-4316-9ea0-9fa01ccd7688"
+version = "0.3.3"
+
+[[deps.PrecompileTools]]
+deps = ["Preferences"]
+git-tree-sha1 = "03b4c25b43cb84cee5c90aa9b5ea0a78fd848d2f"
+uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a"
+version = "1.2.0"
 
 [[deps.Preferences]]
 deps = ["TOML"]
-git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d"
+git-tree-sha1 = "00805cd429dcb4870060ff49ef443486c262e38e"
 uuid = "21216c6a-2e73-6563-6e65-726566657250"
-version = "1.3.0"
+version = "1.4.1"
 
 [[deps.Printf]]
 deps = ["Unicode"]
@@ -176,6 +207,7 @@ version = "1.3.0"
 
 [[deps.SHA]]
 uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"
+version = "0.7.0"
 
 [[deps.Serialization]]
 uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b"
@@ -186,10 +218,12 @@ uuid = "6462fe0b-24de-5631-8697-dd941f90decc"
 [[deps.TOML]]
 deps = ["Dates"]
 uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76"
+version = "1.0.3"
 
 [[deps.Tar]]
 deps = ["ArgTools", "SHA"]
 uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e"
+version = "1.10.0"
 
 [[deps.UUIDs]]
 deps = ["Random", "SHA"]
@@ -201,15 +235,19 @@ uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"
 [[deps.Zlib_jll]]
 deps = ["Libdl"]
 uuid = "83775a58-1f1d-513f-b197-d71354ab007a"
+version = "1.2.13+0"
 
 [[deps.libLLVM_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "8f36deef-c2a5-5394-99ed-8e07531fb29a"
+version = "14.0.6+3"
 
 [[deps.nghttp2_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"
+version = "1.48.0+0"
 
 [[deps.p7zip_jll]]
 deps = ["Artifacts", "Libdl"]
 uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"
+version = "17.4.0+0"

dev/Project.toml

@@ -7,6 +7,6 @@ P4est_jll = "6b5a15aa-cf52-5330-8376-5e5d90283449"
 
 [compat]
 CEnum = "0.4"
-Clang = "0.15, 0.16.0 - 0.16.5, 0.17" # see https://github.com/JuliaInterop/Clang.jl/issues/405
+Clang = "0.17.7"
 MPI = "0.20"
 P4est_jll = "2.8"

dev/README.md

@@ -14,9 +14,8 @@ The general process for creating bindings with Clang.jl is as follows:
 9. Despair.
 
 If you want to try this yourself, proceed as follows. The current version of
-the bindings has been generated using Julia v1.7.3; the corresponding
-`Manifest.toml` file is included for reproducibility. Updating everything
-to Julia v1.8.3 was also successful.
+the bindings has been generated using Julia v1.9.3; the corresponding
+`Manifest.toml` file is included for reproducibility.
 
 To generate new bindings, run
 ```shell

dev/generator.toml

@@ -215,6 +215,10 @@ is_local_header_only = true
 # ```
 smart_de_anonymize = true
 
+# if set to true, static functions will be ignored
+# see https://github.com/trixi-framework/P4est.jl/issues/99
+skip_static_functions = true
+
 # EXPERIMENTAL
 # if this option is set to true, those structs that are not necessary to be an
 # immutable struct will be generated as a mutable struct.