Stable documentation

.github/workflows/multidocs.yml

@@ -21,10 +21,8 @@ jobs:
         run: git config --global init.defaultBranch master
 
       - name: Build GNNGraphs docs
-        run: 
-          julia --project=GNNGraphs/docs/ -e '
+        run: julia --project=GNNGraphs/docs/ -e'
           using Pkg;
-          pkg"dev ./GNNGraphs";
           Pkg.instantiate();
           include("GNNGraphs/docs/make.jl")'
         env:
@@ -34,7 +32,6 @@ jobs:
       - name: Build GNNlib docs
         run: julia --project=GNNlib/docs/ -e '
           using Pkg;
-          pkg"dev ./GNNlib ./GNNGraphs";
           Pkg.instantiate();
           include("GNNlib/docs/make.jl")'
         env:
@@ -44,7 +41,6 @@ jobs:
       - name: Build GNNLux docs
         run: julia --project=GNNLux/docs/ -e '
             using Pkg;
-            pkg"dev ./GNNLux ./GNNlib ./GNNGraphs";
             Pkg.instantiate();
             include("GNNLux/docs/make.jl")'
         env:
@@ -54,7 +50,6 @@ jobs:
       - name: Build GraphNeuralNetworks docs
         run: julia --project=GraphNeuralNetworks/docs/ -e '
             using Pkg;
-            pkg"dev ./GraphNeuralNetworks ./GNNlib ./GNNGraphs";
             Pkg.instantiate();
             include("GraphNeuralNetworks/docs/make.jl")'
         env:
@@ -66,15 +61,8 @@ jobs:
       - name: Install dependencies for multidocs
         run: julia --project=docs/ -e '
           using Pkg;
-          pkg"dev ./GraphNeuralNetworks ./GNNlib ./GNNGraphs ./GNNLux";
           Pkg.instantiate();'
-      - name: Check if objects.inv exists for GraphNeuralNetworks
-        run: |
-          if [ -f GraphNeuralNetworks/docs/build/objects.inv ]; then
-            echo "GraphNeuralNetworks: objects.inv exists."
-          else
-            echo "GraphNeuralNetworks: objects.inv does not exist!" && exit 1
-          fi
+
       - name: Config git
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} # For authentication with GitHub Actions token

GNNGraphs/docs/make.jl

@@ -2,8 +2,7 @@ using Documenter
 using DocumenterInterLinks
 using GNNGraphs
 using MLUtils # this is needed by setdocmeta!
-import Graphs
-using Graphs: induced_subgraph
+using Graphs
 
 
 DocMeta.setdocmeta!(GNNGraphs, :DocTestSetup, :(using GNNGraphs, MLUtils); recursive = true)

GNNGraphs/docs/src/api/heterograph.md

@@ -23,6 +23,9 @@ Pages   = ["gnnheterograph/query.jl"]
 Private = false
 ```
 
+```@docs
+Graphs.has_edge(g::GNNHeteroGraph, edge_t::EType, i::Integer, j::Integer)
+```
 ## Transform
 
 ```@autodocs

GNNGraphs/src/gnnheterograph/query.jl

@@ -12,7 +12,7 @@ edge_index(g::GNNHeteroGraph{<:COO_T}) = only(g.graph)[2][1:2]
 get_edge_weight(g::GNNHeteroGraph{<:COO_T}, edge_t::EType) = g.graph[edge_t][3]
 
 """
-    has_edge(g::GNNHeteroGraph, edge_t, i, j)
+    Graphs.has_edge(g::GNNHeteroGraph, edge_t::EType, i::Integer, j::Integer)
 
 Return `true` if there is an edge of type `edge_t` from node `i` to node `j` in `g`.
 

GNNGraphs/src/sampling.jl

@@ -119,7 +119,7 @@ end
 
 
 """
-    induced_subgraph(graph, nodes)
+    Graphs.induced_subgraph(graph::GNNGraph, nodes::Vector{Int})
 
 Generates a subgraph from the original graph using the provided `nodes`. 
 The function includes the nodes' neighbors and creates edges between nodes that are connected in the original graph.