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Source codes for Integrated single-cell analysis reveals distinct epigenetic-regulated cancer cell states and heterogeneity-guided core signature in tamoxifen-resistant breast cancer

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scRNAscATAC

Source codes for Integrated single-cell analysis reveals distinct epigenetic-regulated cancer cell states and heterogeneity-guided core signature in tamoxifen-resistant breast cancer

The folders contains the source codes for reproducing main figures and their supplementary figures.

If you find the codes are useful, consider cite our paper Integrated single-cell analysis reveals distinct epigenetic-regulated cancer cell states and a heterogeneity-guided core signature in tamoxifen-resistant breast cancer. Thank you:)!

Updated information

Note codes use Seurat (v4.3.0), might not be compatible with v5

Several changes were made after the codes deposited

Codes for figures in publication should reorder:

Fig.1: Folder Fig1  
Fig.2: Folder Fig2 and Folder Fig3  
Fig.3: Folder Fig4  
Fig.4: Folder Fig5  
Fig.5: Folder Fig6  
Folder Fig7's content all move to Supple.  

Please feel free to contact me for accessing the processed data and open an issue if you have any question about the codes.

Cheers!

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Source codes for Integrated single-cell analysis reveals distinct epigenetic-regulated cancer cell states and heterogeneity-guided core signature in tamoxifen-resistant breast cancer

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