RFC: Fix Unit Tests #2
Workflow file for this run
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name: MHKiT-MATLAB Windows Unit Tests | |
on: | |
push: | |
branches: [master, develop, ebbflood] | |
pull_request: | |
branches: [master, develop, ebbflood] | |
jobs: | |
main: | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [windows-latest] | |
python-version: [3.8, 3.9, "3.10", 3.11] | |
matlab-version: [R2021b, R2022a, R2022b, R2023a, R2023b] | |
exclude: | |
- matlab-version: R2023b | |
python-version: 3.8 | |
- matlab-version: R2023a | |
python-version: 3.11 | |
- matlab-version: R2022b | |
python-version: 3.11 | |
- matlab-version: R2022a | |
python-version: 3.11 | |
- matlab-version: R2022a | |
python-version: "3.10" | |
- matlab-version: R2021b | |
python-version: 3.11 | |
- matlab-version: R2021b | |
python-version: "3.10" | |
- matlab-version: R2021a | |
python-version: 3.11 | |
- matlab-version: R2021a | |
python-version: "3.10" | |
- matlab-version: R2021a | |
python-version: 3.9 | |
- matlab-version: R2020b | |
python-version: 3.11 | |
- matlab-version: R2020b | |
python-version: "3.10" | |
- matlab-version: R2020b | |
python-version: 3.9 | |
runs-on: ${{ matrix.os }} | |
env: | |
mhkit-python-dir: "MHKiT-Python" | |
steps: | |
- name: Install/Setup Miniconda | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
auto-update-conda: true | |
python-version: ${{ matrix.python-version }} | |
activate-environment: mhkit | |
channels: conda-forge | |
# - name: "Conda install h5py, netcdf4, and cython" | |
# run: | | |
# conda activate mhkit | |
# conda install -c conda-forge h5py netcdf4 cython | |
- name: "Conda install h5py, netcdf4, and cython" | |
run: | | |
conda activate mhkit | |
conda install numpy cython pip pytest hdf5 libnetcdf cftime netcdf4 --strict-channel-priority | |
- name: Output python executable | |
run: | | |
conda activate mhkit | |
python -c "import sys; print(sys.executable)" | |
- name: Print Python Version | |
run: | | |
conda activate mhkit | |
python --version | |
- name: Check out MHKiT-MATLAB | |
uses: actions/checkout@v4 | |
- name: Check out MHKiT-Python | |
uses: actions/checkout@v4 | |
with: | |
repository: "MHKiT-Software/MHKiT-Python" | |
path: ${{env.mhkit-python-dir}} | |
- name: pip install mhkit from source | |
working-directory: ${{env.mhkit-python-dir}} | |
run: | | |
conda activate mhkit | |
pip install -e . | |
- name: pip install mhkit-python-utils module from source | |
run: | | |
conda activate mhkit | |
pip install -e . | |
- name: List installed pip modules | |
run: | | |
conda activate mhkit | |
pip freeze | |
# Note, does not work, fails with error: RuntimeError: MATLAB installation not found in Windows Registry: [WinError 2] The system cannot find the file specified | |
# - name: Install MATLAB Engine API for Python on Windows | |
# if: ${{ matrix.os == 'windows-latest' }} | |
# run: python -m pip install matlabengine==9.14.3 | |
# run: "pip3 install matlabengine --only-binary=:all:" | |
# - name: Test MHKiT-Python | |
# if: ${{ matrix.os == 'windows-latest' }} | |
# run: | | |
# pip install nose pytest | |
# nosetests -v --traverse-namespace mhkit | |
# working-directory: ${{env.mhkit-python-dir}} | |
# # if: always() && steps.runTests.outcome == 'failure' | |
- name: Set up MATLAB | |
uses: matlab-actions/setup-matlab@v1 | |
with: | |
release: ${{ matrix.matlab-version }} | |
# OutOfProcess works reliably on linux and macos, on Windows | |
# OutOfProcess fails with error: | |
# Caught "std::exception" Exception message is: | |
# Unable to launch Simple server: Unable to launch C:\Program Files\MATLAB\R2023b\interprocess\bin\win64\pycli\MATLABPyHost.exe | |
# because: Peer process exited before transport type handshake. Exit status: 3221226505 | |
# ERROR: MATLAB error Exit Status: 0x00000001 | |
# exit status 1 | |
- name: Configure MATLAB pyenv Version and ExecutionMode | |
if: ${{ matrix.os == 'windows-latest' }} | |
shell: pwsh | |
run: > | |
"pyenv(Version='{0}', ExecutionMode='InProcess')" -f (python -c "import sys; print(sys.executable)") | Out-File -FilePath run.m | |
- name: Add MATLAB test commands | |
shell: bash | |
run: echo "version, | |
addpath(genpath('mhkit')), | |
import matlab.unittest.TestSuite, | |
import matlab.unittest.TestRunner, | |
testFolder = ['mhkit' filesep 'tests'], | |
suite = TestSuite.fromFolder(testFolder), | |
runner = TestRunner.withTextOutput, | |
results = runner.run(suite), | |
assertSuccess(results)" >> run.m | |
- name: Output Run.m | |
shell: bash | |
run: cat run.m | |
- name: Run MHKiT-MATLAB Unit Tests | |
uses: matlab-actions/run-command@v1 | |
with: | |
command: run | |
startup-options: -noFigureWindows |