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Add anndata factory#255

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mschwoer wants to merge 17 commits intomainMannLabs/alphabase:mainfrom add_anndata_factoryMannLabs/alphabase:add_anndata_factoryCopy head branch name to clipboard

+532-22

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Commits on Jan 23, 2025

• add first anndata conversion

  mschwoer

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  58618cf

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• add first anndata conversion

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  de6fea2

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• add anndata dependency

  mschwoer

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• add possibility to add custom column mapping

  mschwoer

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  f8e71e4

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• nice error message on unsupported readers

  mschwoer

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  f8cc6c8

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• refactor and add unit tests

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• add tutorial notebook

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• add anndata tests

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• use only first protein

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• add reference data

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• add potentially correct columns

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• use potentially correct columns

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• add intensity column to diann output

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• adapt test references

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  979a334

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• fix merge conflicts

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  577647e

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• reorder

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  2ba3087

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• relax anndata requirement

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