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Add hdf5 response format #1292

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Add hdf5 response format #1292

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e2d8010
Added support for returning optimade data in the hdf5 format.
JPBergsma Jul 28, 2022
079bd71
Added extra doctstrings to hdf5.py and made setting for enabling/disa…
JPBergsma Jul 29, 2022
0b71e9e
Added dependancies for hdf5 response to requirements.txt and setup.py.
JPBergsma Jul 29, 2022
9167351
Added enabled_response_formats to test config and disabled hdf5 tests…
JPBergsma Jul 29, 2022
7551132
Added enabled_response_formats to test config and disabled hdf5 tests…
JPBergsma Jul 29, 2022
e43297e
Merge branch 'master' into JPBergsma/add_HDF5_output_format
JPBergsma Jul 29, 2022
d811457
merges changes from master.
JPBergsma Jul 29, 2022
7952092
checking whether the not installing of numpy on github server was cau…
JPBergsma Jul 29, 2022
694894f
added hdf5_deps to extras_require.
JPBergsma Jul 29, 2022
8d51f55
Added numpy and h5py to install_requirements in setup.py
JPBergsma Jul 29, 2022
12b79e0
Use a query that does not have an _exampl_ field to test response for…
JPBergsma Jul 29, 2022
9fe4dcc
Added extra test and the supported response formats are now listed at…
JPBergsma Aug 3, 2022
1981032
Made some changes to the docstrings and type definitions so it will h…
JPBergsma Aug 4, 2022
79b48d6
The test for the single entry point did not work. This is fixed now
JPBergsma Aug 4, 2022
687ea78
Added more thorough check to see whetehr the response contnet type is…
JPBergsma Aug 4, 2022
fbfe0f7
Remove numpy and h5py from 'install_requires'.
JPBergsma Aug 4, 2022
a55bd82
Revert "Remove numpy and h5py from 'install_requires'."
JPBergsma Aug 4, 2022
43e326f
Remove h5py_deps and put numpy and h5py back in install_requires.
JPBergsma Aug 4, 2022
1e7e3f9
Processed comments from code review.
JPBergsma Aug 9, 2022
50cacf0
Fixed test_response_format.py
JPBergsma Aug 9, 2022
82f2b31
Added extra test values, and added support for handling nested lists …
JPBergsma Aug 9, 2022
15770f9
Merge branch 'master' into JPBergsma/add_HDF5_output_format
JPBergsma Aug 9, 2022
42864cb
Added extra test to check if response_format is in the enabled_respon…
JPBergsma Aug 10, 2022
7c6a562
Merge branch 'JPBergsma/add_HDF5_output_format' of https://github.com…
JPBergsma Aug 10, 2022
30af05a
Added filenames to the header.
JPBergsma Aug 15, 2022
47fa9ad
Changed the way the collection name is determined for the file name o…
JPBergsma Aug 16, 2022
9ef6b05
Merge branch 'master' into JPBergsma/add_HDF5_output_format
JPBergsma Sep 15, 2022
4ada284
Update requirements.txt
JPBergsma Sep 15, 2022
f1c309d
updated version requirement numpy in requirements.txt
JPBergsma Sep 18, 2022
b32278f
Small fields are now stored as attributes rather than datasets.
JPBergsma Sep 21, 2022
9597cca
Merge branch 'master' into JPBergsma/add_HDF5_output_format
JPBergsma Sep 21, 2022
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Update requirements.txt 
put requirements in alphabetical order
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@JPBergsma
JPBergsma authored Sep 15, 2022
commit 4ada2849d4469d7ac426d96932b95519063fe3c6
2 changes: 1 addition & 1 deletion requirements.txt
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Original file line number Diff line number Diff line change
@@ -1,10 +1,10 @@
elasticsearch-dsl==7.4.0
email_validator==1.2.1
fastapi==0.82.0
h5py==3.7.0
lark==1.1.2
mongomock==4.1.2
numpy==1.23.0
fastapi==0.82.0
pydantic==1.10.2
pymongo==4.2.0
pyyaml==5.4
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