Skip to content

Commit

Permalink
update: after Rossella's input (#74)
Browse files Browse the repository at this point in the history
  • Loading branch information
@az-ihsan
az-ihsan authored Jul 23, 2024
1 parent 44ec9a3 commit cfb3104
Show file tree
Hide file tree
Showing 8 changed files with 1,670 additions and 1,575 deletions.
78 changes: 38 additions & 40 deletions CQs/v_2_0/CQs.md
View file
Original file line number Diff line number Diff line change
Expand Up @@ -15,27 +15,26 @@ Below are the competency questions (CQs) modularized according to PRIMA modules.
9. Which data were used and produced in the data analysis/processing/interpretation?
10. Which software was used in the data analysis/processing/interpretation?
11. Which researcher(s) did perform the data analysis/processing/interpretation?
12. Which process to do a data analysis lifecycle, data analysis, data processing, or data intepretation?
12. Which (sub)processes to do a data analysis lifecycle, data analysis, data processing, or data intepretation?

## [PRIMA-Dataset](#prima-dataset-sparql)
13. Which project is the data attributed to?
14. Which data does the dataset collects?
15. In which data collaboration platform is the data stored?
16. In which data repository is the data published?
17. Which dataset was the publication data derived from?
18. Which metadata describes the data?
13. Which project is the research data attributed to?
14. Which research data are contained in the dataset?
15. Where is the research data/dataset/published data stored?
16. Which dataset was the publication data derived from?
17. Which metadata describes the research data?

## [PRIMA-Experiment](#prima-experiment-sparql)
19. Which fabrication(s)/sample preparation(s)/measurement(s) were performed in the study?
20. Which equipment/instrument(s) were used in the fabrication/sample preparation/measurement?
21. Which technique(s) was used in the measurement?
22. Where and when was the fabrication/sample preparation/measurement performed?
23. Which researcher(s) did perform the fabrication/sample preparation/measurement?
25. Which sample(s) was used in the measurement?
26. Which raw data was produced in the measurement?
27. Who did prepare the sample?
28. What process sequence taken for doing a fabrication/measurement/sample preparation?
29. Which sample component(s) is the sample made of?
18. Which fabrication(s)/sample preparation(s)/measurement(s) were performed in the study?
19. Which equipment/instrument(s) were used in the fabrication/sample preparation/measurement?
20. Which technique(s) was used in the measurement?
21. Where and when was the fabrication/sample preparation/measurement performed?
22. Which researcher(s) did perform the fabrication/sample preparation/measurement?
23. Which sample(s) was used in the measurement?
24. Which raw data was produced in the measurement?
25. Who did prepare the sample?
26. What (sub)processes taken for doing a fabrication/measurement/sample preparation?
27. Which sample component(s) is the sample made of?


# Answer to CQs via SPARQL
Expand All @@ -48,7 +47,7 @@ PREFIX prov: <http://www.w3.org/ns/prov#>
SELECT ?Project ?ResearchUser WHERE{
?Project a core:Project ;
prov:wasAttributedTo ?ResearchUser .
core:hasProjectMember ?ResearchUser .
?ResearchUser a core:ResearchUser ;
core:performsAgentRole ?role .
?role a core:ProjectMemberRole .
Expand All @@ -61,8 +60,6 @@ PREFIX core: <https://purls.helmholtz-metadaten.de/prima/core#>
PREFIX prov: <http://www.w3.org/ns/prov#>
SELECT ?Study ?ResearchUser WHERE{
?Project a core:Project ;
core:hasStudy ?Study.
?Study prov:wasAttributedTo ?ResearchUser.
?ResearchUser a core:ResearchUser .
}
Expand Down Expand Up @@ -143,7 +140,7 @@ PREFIX prov: <http://www.w3.org/ns/prov#>
PREFIX pmd: <https://w3id.org/pmd/co/>
SELECT ?Project ?Study ?DataAnalysisLifecycle ?DataAcquisition WHERE{
?Project core:hasStudy ?Study .
?Study prov:wasAttributedTo ?Project .
?Study a core:Study.
{
?Study core:hasDataAnalysisLifecycle ?DataAnalysisLifecycle .
Expand All @@ -157,7 +154,7 @@ SELECT ?Project ?Study ?DataAnalysisLifecycle ?DataAcquisition WHERE{

## PRIMA-Data analysis lifecycle SPARQL

7. Which research data resulted from the data analysis lifecycle?
7. Which result(s) were obtained from the data analysis lifecycle?
```
PREFIX core: <https://purls.helmholtz-metadaten.de/prima/core#>
PREFIX dal: <https://purls.helmholtz-metadaten.de/prima/dal#>
Expand Down Expand Up @@ -222,7 +219,7 @@ SELECT ?Data_analysis_lifecycle ?data_processing ?data_analysis ?data_interpret
}
}
```
9. Which data have been used and produced in a data analysis/processing/intreptation?
9. Which data were used and produced in the data analysis/processing/interpretation?
9a. Data analysis
```
PREFIX core: <https://purls.helmholtz-metadaten.de/prima/core#>
Expand Down Expand Up @@ -267,7 +264,7 @@ SELECT ?Data_interpretation ?input ?output WHERE{
pmd:output ?output.
}
```
10. Which software has been used in a data analysis/processing/interpretation?
10. Which software was used in the data analysis/processing/interpretation?

10a. Data analysis
```
Expand Down Expand Up @@ -311,7 +308,7 @@ SELECT ?Data_interpretation ?software WHERE{
}
```

11. Which researcher(s) have performed the data analysis/processing/interpretation?
11. Which researcher(s) did perform the data analysis/processing/interpretation?

11a. Data analysis
```
Expand Down Expand Up @@ -358,16 +355,17 @@ SELECT ?Data_interpretation ?software WHERE{
}
```

12. Which process to do a data analysis lifecycle, data analysis, data processing, or data intepretation?
12. Which (sub)processes to do a data analysis lifecycle, data analysis, data processing, or data intepretation?
```
```

## PRIMA-Dataset SPARQL

### \<still under the development\>

## PRIMA-Experiment SPARQL

19. Which measurements/sample preparation/fabrication have been performed in a study?
18. Which fabrication(s)/sample preparation(s)/measurement(s) were performed in the study?
```
PREFIX core: <https://purls.helmholtz-metadaten.de/prima/core#>
PREFIX dal: <https://purls.helmholtz-metadaten.de/prima/dal#>
Expand Down Expand Up @@ -395,7 +393,7 @@ SELECT ?Experiment ?Measurement ?Sample_preparation ?Fabrication WHERE {
}
```
20. Which equipment/instrument has been used in an Fabrication/in a measurement/in a sample preparation?
19. Which equipment/instrument(s) were used in the fabrication/sample preparation/measurement?
```
PREFIX core: <https://purls.helmholtz-metadaten.de/prima/core#>
PREFIX dal: <https://purls.helmholtz-metadaten.de/prima/dal#>
Expand Down Expand Up @@ -426,7 +424,7 @@ SELECT ?Equipment ?Fabrication ?Measurement ?Sample_preparation WHERE {
}
```
21. Which measurement techniques have been used in a measurement?
20. Which technique(s) was used in the measurement?
```
PREFIX core: <https://purls.helmholtz-metadaten.de/prima/core#>
PREFIX dal: <https://purls.helmholtz-metadaten.de/prima/dal#>
Expand All @@ -440,9 +438,9 @@ SELECT ?Measurement ?Technique WHERE {
core:hasTechnique ?Technique.
}
```
22. Where and when has the fabrication/measurement/sample preparation been performed?
21. Where and when was the fabrication/sample preparation/measurement performed?

22a. Fabrication
21a. Fabrication
```
PREFIX core: <https://purls.helmholtz-metadaten.de/prima/core#>
PREFIX dal: <https://purls.helmholtz-metadaten.de/prima/dal#>
Expand Down Expand Up @@ -471,7 +469,7 @@ SELECT ?Fabrication ?At_time ?Start_time ?End_time ?Location WHERE {
}
```

22b. Measurement
21b. Measurement
```
PREFIX core: <https://purls.helmholtz-metadaten.de/prima/core#>
PREFIX dal: <https://purls.helmholtz-metadaten.de/prima/dal#>
Expand All @@ -497,7 +495,7 @@ SELECT ?Measurement ?At_time ?Start_time ?End_time ?Location WHERE {
}
}
```
22c. Sample preparation
21c. Sample preparation
```
PREFIX core: <https://purls.helmholtz-metadaten.de/prima/core#>
PREFIX dal: <https://purls.helmholtz-metadaten.de/prima/dal#>
Expand Down Expand Up @@ -525,7 +523,7 @@ SELECT ?Sample_preparation ?At_time ?Start_time ?End_time ?Location WHERE {
```


23. Which researcher(s) have performed a fabrication/measurement/sample preparation?
22. Which researcher(s) did perform the fabrication/sample preparation/measurement?
```
PREFIX core: <https://purls.helmholtz-metadaten.de/prima/core#>
PREFIX dal: <https://purls.helmholtz-metadaten.de/prima/dal#>
Expand Down Expand Up @@ -555,7 +553,7 @@ SELECT ?Fabrication ?Measurement ?Sample_preparation ?Research_user WHERE{
}
```
24. Which samples have been used in a measurement?
23. Which sample(s) was used in the measurement?
```
PREFIX core: <https://purls.helmholtz-metadaten.de/prima/core#>
PREFIX dal: <https://purls.helmholtz-metadaten.de/prima/dal#>
Expand All @@ -569,7 +567,7 @@ SELECT ?Measurement ?Sample WHERE{
pmd:input ?Sample .
}
```
25. Which raw data have been produced in a measurement?
24. Which raw data was produced in the measurement?
```
PREFIX core: <https://purls.helmholtz-metadaten.de/prima/core#>
PREFIX dal: <https://purls.helmholtz-metadaten.de/prima/dal#>
Expand All @@ -583,7 +581,7 @@ SELECT ?Measurement ?Raw_data WHERE{
pmd:output ?Raw_data .
}
```
26. Who has prepared the samples in the sample preparation step?
25. Who did prepare the sample?
```
PREFIX core: <https://purls.helmholtz-metadaten.de/prima/core#>
PREFIX dal: <https://purls.helmholtz-metadaten.de/prima/dal#>
Expand All @@ -598,9 +596,9 @@ SELECT ?Sample_preparation ?Research_user WHERE{
?Research_user a core:ResearchUser .
}
```
27. What process sequence taken for doing an Fabrication/measurement/sample preparation?
26. What (sub)process sequence taken for doing a fabrication/measurement/sample preparation?

27.a Fabrication
26.a Fabrication
```
PREFIX exp: <https://purls.helmholtz-metadaten.de/prima/experiment#>
PREFIX pmd: <https://w3id.org/pmd/co/>
Expand All @@ -614,7 +612,7 @@ SELECT ?last_action_lbl ?current_action_lbl WHERE{
}
```
28. Which sample components is the sample made of?
27. Which sample component(s) is the sample made of??
```
PREFIX exp: <https://purls.helmholtz-metadaten.de/prima/experiment#>
Expand Down
Loading

0 comments on commit cfb3104

Please sign in to comment.