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PopGenTheory Discussion Group

Meeting times are Mondays from 3:30-4:30 pm CT (1:30-2:30 pm PT) in 409 Borlaug Hall (UMN) or Bio Sci 3622 (UCI). You can also join remotely via Zoom meeting ID 658-235-858 or join URL.

What is this discussion group?

  • Informal discussion centered on Population Genetics, Evolutionary Genetics, and Quantitative Genetics theory
  • Focused on reading relevant books, classic literature, understanding modern tools and their applications, and interpretating results

General Plan

We will discuss Statistical Population Genomics this spring. Please see below for a more detailed schedule.


Spring 2020 Schedule

February 24, 2020 - Group Discussion

A Population Genomics Lexicon.
Statistical Population Genomics

March 2, 2020 - Postponed due to schedule conficts

Break this week!

March 9, 2020 - Group Discussion

Processing and Analyzing Multiple Genomes Alignments with MafFilter.
Statistical Population Genomics

March 16, 2020 - Group Discussion

Exploring Population Structure with Admixture Models and Principal Component Analysis.
Statistical Population Genomics

March 23, 2020 - Group Discussion

Detecting Positive Selection in Populations Using Genetic Data.
Statistical Population Genomics

March 30, 2020 - Group Discussion

polyDFE: Inferring the Distribution of Fitness Effects and Properties of Beneficial Mutations from Polymorphism Data.
Statistical Population Genomics

April XX, 2020 - Lead by TBD

MSMC and MSMC2: The Multiple Sequentially Markovian Coalescent.
Statistical Population Genomics

April XX, 2020 - Lead by TBD

Ancestral Population Genomics with Jocx, a Coalescent Hidden Markov Model.
Statistical Population Genomics

April XX, 2020 - Lead by TBD

Coalescent Simulation with msprime.
Statistical Population Genomics

April XX, 2020 - Lead by TBD

Inference of Ancestral Recombination Graphs Using ARGweaver.
Statistical Population Genomics

May XX, 2020 - Lead by TBD

Population Genomics of Transitions to Selfing in Brassicaceae Model Systems.
Statistical Population Genomics

May XX, 2020 - Lead by TBD

Genomics of Long- and Short-Term Adaptation in Maize and Teosintes.
Statistical Population Genomics

May XX, 2020 - Lead by TBD

Population Genomics of Fungal Plant Pathogens and the Analyses of Rapidly Evolving Genome Compartments.
Statistical Population Genomics

May XX, 2020 - Lead by TBD

Population Genomics on the Fly: Recent Advances in Drosophila.
Statistical Population Genomics

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Informal discussion group centered on population genetics and evolutionary genetics theory.

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