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Add example data for vg module #329

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16 changes: 16 additions & 0 deletions data/modules/vg/Example1.vgstats
Original file line number Diff line number Diff line change
@@ -0,0 +1,16 @@
Total alignments: 729236214
Total primary: 729236214
Total secondary: 0
Total aligned: 721047578
Total perfect: 357674895
Total gapless (softclips allowed): 715967271
Total paired: 729236214
Total properly paired: 718683476
Alignment score: mean 142.001, median 156, stdev 29.1807, max 161 (357674895 reads)
Mapping quality: mean 53.1302, median 60, stdev 17.6347, max 60 (603414249 reads)
Insertions: 6533534 bp in 2282841 read events
Deletions: 10519502 bp in 4179720 read events
Substitutions: 490824539 bp in 490824539 read events
Softclips: 10030341073 bp in 232993653 read events
Total time: 315875 seconds
Speed: 2308.62 reads/second
16 changes: 16 additions & 0 deletions data/modules/vg/Example2.vgstats
Original file line number Diff line number Diff line change
@@ -0,0 +1,16 @@
Total alignments: 786889820
Total primary: 786889820
Total secondary: 0
Total aligned: 777651532
Total perfect: 382250293
Total gapless (softclips allowed): 772411557
Total paired: 786889820
Total properly paired: 774424970
Alignment score: mean 141.081, median 156, stdev 30.4529, max 161 (382250293 reads)
Mapping quality: mean 52.9098, median 60, stdev 17.7611, max 60 (643610302 reads)
Insertions: 6503589 bp in 2310323 read events
Deletions: 10842444 bp in 4336335 read events
Substitutions: 544551412 bp in 544551412 read events
Softclips: 11476128752 bp in 248401284 read events
Total time: 771240 seconds
Speed: 1020.29 reads/second
16 changes: 16 additions & 0 deletions data/modules/vg/Example3.vgstats
Original file line number Diff line number Diff line change
@@ -0,0 +1,16 @@
Total alignments: 739258320
Total primary: 739258320
Total secondary: 0
Total aligned: 729017724
Total perfect: 251306095
Total gapless (softclips allowed): 724990210
Total paired: 739258320
Total properly paired: 725827578
Alignment score: mean 130.776, median 142, stdev 33.5437, max 161 (251306095 reads)
Mapping quality: mean 52.1781, median 60, stdev 18.2659, max 60 (582452618 reads)
Insertions: 5044236 bp in 1811571 read events
Deletions: 7921323 bp in 3216687 read events
Substitutions: 410262341 bp in 410262341 read events
Softclips: 18040474418 bp in 380727161 read events
Total time: 242513 seconds
Speed: 3048.32 reads/second
16 changes: 16 additions & 0 deletions data/modules/vg/Example4.vgstats
Original file line number Diff line number Diff line change
@@ -0,0 +1,16 @@
Total alignments: 730548654
Total primary: 730548654
Total secondary: 0
Total aligned: 721307398
Total perfect: 386672125
Total gapless (softclips allowed): 717664852
Total paired: 730548654
Total properly paired: 718768480
Alignment score: mean 128.009, median 127, stdev 31.1766, max 161 (233234730 reads)
Mapping quality: mean 52.6357, median 60, stdev 18.0368, max 60 (589508652 reads)
Insertions: 4426348 bp in 1586522 read events
Deletions: 7453493 bp in 2949472 read events
Substitutions: 286626521 bp in 286626521 read events
Softclips: 10771990278 bp in 243191179 read events
Total time: 329860 seconds
Speed: 2214.72 reads/second
16 changes: 16 additions & 0 deletions data/modules/vg/Example5.vgstats
Original file line number Diff line number Diff line change
@@ -0,0 +1,16 @@
Total alignments: 664591582
Total primary: 664591582
Total secondary: 0
Total aligned: 655979478
Total perfect: 363516082
Total gapless (softclips allowed): 652860524
Total paired: 664591582
Total properly paired: 654215568
Alignment score: mean 126.901, median 120, stdev 30.9958, max 161 (206026986 reads)
Mapping quality: mean 53.2774, median 60, stdev 17.3, max 60 (544260913 reads)
Insertions: 3526767 bp in 1328111 read events
Deletions: 6021632 bp in 2530401 read events
Substitutions: 233700838 bp in 233700838 read events
Softclips: 9414144709 bp in 214751192 read events
Total time: 244311 seconds
Speed: 2720.27 reads/second
16 changes: 16 additions & 0 deletions data/modules/vg/Example6.vgstats
Original file line number Diff line number Diff line change
@@ -0,0 +1,16 @@
Total alignments: 692190260
Total primary: 692190260
Total secondary: 0
Total aligned: 682558448
Total perfect: 342923792
Total gapless (softclips allowed): 679220872
Total paired: 692190260
Total properly paired: 680099028
Alignment score: mean 125.714, median 121, stdev 31.9556, max 161 (204203139 reads)
Mapping quality: mean 52.374, median 60, stdev 18.2084, max 60 (550224357 reads)
Insertions: 4040508 bp in 1436180 read events
Deletions: 6791516 bp in 2698121 read events
Substitutions: 262736438 bp in 262736438 read events
Softclips: 11863306621 bp in 258005799 read events
Total time: 252920 seconds
Speed: 2736.8 reads/second