update MOM6, ocean_BGC hashes and model configs, add NWA12.CFC test, and refactor NWA12.COBALT test #107

	name: mom6_obgc_1d

	on:
	push:
	branches: [ "main" ]
	pull_request:
	branches: [ "main" ]

	jobs:
	build:
	runs-on: ubuntu-latest

	container:
	image: clouden90/1d_mom6_cobalt:base
	options: --user=root

	env:
	PR_NUMBER: ${{ github.event.number }}

	steps:
	- name: Checkout
	uses: actions/checkout@v4
	with:
	submodules: recursive

	- name: Build mom6-sis2-cobalt
	run: \|
	apt update; apt install -y wget
	echo "build mom6-sis2-cobalt ..."
	cd ./builds
	./linux-build.bash -m docker -p linux-gnu -t prod -f mom6sis2

	- name: Download 1d model dataset
	run: \|
	cd ./exps
	wget ftp.gfdl.noaa.gov:/pub/Yi-cheng.Teng/1d_datasets.tar.gz && tar -zxvf 1d_datasets.tar.gz && rm -rf 1d_datasets.tar.gz

	- name: Run 1D toy case and check repro across restarts
	run: \|
	cd exps/OM4.single_column.COBALT
	mpirun --allow-run-as-root -np 1 ../../builds/build/docker-linux-gnu/ocean_ice/prod/MOM6SIS2

	- name: Check ref
	run: \|
	cd exps/OM4.single_column.COBALT
	cat ./ocean.stats
	diff -q ref/ocean.stats ./ocean.stats > /dev/null \|\| { echo "Error: ocean.stats are different, check and update ref! Exiting now..."; exit 1; }

Provide feedback